RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MYLK2Q9H1R3 596 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 KCNN2Q9H2S1 579 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 ZNF702PQ9H963 129 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 CCNB1IP1Q9NPC3 277 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 NANSQ9NR45 359 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 TMCC3Q9ULS5 477 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 FIS1Q9Y3D6 152 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 CCL27Q9Y4X3 112 aa5.87□□□□□ -1.47
VCAN-207ENST00000507162 LOC100509620A0A075B734 347 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 A0A096LPI6 279 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 RNF103-CHMP3A0A140T963 221 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 A0A1B0GVI7 797 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 ADAM20O43506 726 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 OR2T1O43869 369 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 FZD7O75084 574 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 THY1P04216 161 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 QDPRP09417 244 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 LINC00032P0C843 101 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 PRG2P13727 222 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 IRF2P14316 349 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 PAX6P26367 422 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 CHATP28329 748 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 RPL3P39023 403 aaKnown RBP5.86□□□□□ -1.47
VCAN-207ENST00000507162 PMELP40967 661 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 MAGEA4P43358 317 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 HTR5AP47898 357 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 PRKAA2P54646 552 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 EGR4Q05215 589 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 FUT5Q11128 374 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 KLRD1Q13241 179 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 SYPL1Q16563 259 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 PGS1Q32NB8 556 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 CDONQ4KMG0 1287 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 IL23RQ5VWK5 629 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 SFRP4Q6FHJ7 346 aaPredicted RBP5.86□□□□□ -1.47
VCAN-207ENST00000507162 LRFN4Q6PJG9 635 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 NET1Q7Z628 596 aaPredicted RBP5.86□□□□□ -1.47
VCAN-207ENST00000507162 C10orf53Q8N6V4 93 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 ANKFN1Q8N957 763 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 OR10AD1Q8NGE0 317 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 GATAD1Q8WUU5 269 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 C17orf50Q8WW18 174 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 METTL2AQ96IZ6 378 aaKnown RBP5.86□□□□□ -1.47
VCAN-207ENST00000507162 MEGF10Q96KG7 1140 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 OSBPL9Q96SU4 736 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 MCRIP2Q9BUT9 160 aaKnown RBP5.86□□□□□ -1.47
VCAN-207ENST00000507162 DPH5Q9H2P9 285 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 ZMAT4Q9H898 229 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 ELOVL3Q9HB03 270 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 TNFRSF12AQ9NP84 129 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 ATAD3AQ9NVI7 634 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 CTSZQ9UBR2 303 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 HECTD4Q9Y4D8 3996 aa5.86□□□□□ -1.47
VCAN-207ENST00000507162 A0A087WUJ7 227 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 C11orf98E9PRG8 122 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 CHST1O43916 411 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 NPHS1O60500 1241 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 RAMP3O60896 148 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 CPSF4O95639 269 aaKnown RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 GUSBP08236 651 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 MMP7P09237 267 aaPredicted RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 GSTM3P21266 225 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 PRPH2P23942 346 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 ATP5F1P24539 256 aaPredicted RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 SAA4P35542 130 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 PSMB10P40306 273 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 ECI1P42126 302 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 SRP9P49458 86 aaKnown RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 BMXP51813 675 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 HOXA4Q00056 320 aaPredicted RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 HOXC5Q00444 222 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 CALCOCO2Q13137 446 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 FAM69AQ5T7M9 428 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 ARL9Q6T311 187 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 NHLRC1Q6VVB1 395 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 OVCH2Q7RTZ1 564 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 CENPVQ7Z7K6 275 aaPredicted RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 IGFN1Q86VF2 1251 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 MRPL41Q8IXM3 137 aaKnown RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 CLECL1Q8IZS7 167 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 KRTCAP2Q8N6L1 136 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 NATD1Q8N6N6 113 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 LINC00482Q8N8I6 264 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 SPC24Q8NBT2 197 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 BEND2Q8NDZ0 799 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 OR2T11Q8NH01 316 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 WIPF2Q8TF74 440 aaPredicted RBP5.85□□□□□ -1.47
VCAN-207ENST00000507162 ST8SIA4Q92187 359 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 SLC38A4Q969I6 547 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 TMEM54Q969K7 222 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 ISOC1Q96CN7 298 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 C4orf45Q96LM5 186 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 DUSP26Q9BV47 211 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 ASPNQ9BXN1 380 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 PRSS22Q9GZN4 317 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 MEGF9Q9H1U4 602 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 MUC13Q9H3R2 512 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 POFUT1Q9H488 388 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 GSTO2Q9H4Y5 243 aa5.85□□□□□ -1.47
VCAN-207ENST00000507162 MTHFD2LQ9H903 347 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms