RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 PGM2L1Q6PCE3 622 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 SHQ1Q6PI26 577 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 VTCN1Q7Z7D3 282 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 PEG10Q86TG7 708 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 POU5F2Q8N7G0 328 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 IPCEF1Q8WWN9 437 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 FAM162AQ96A26 154 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 MARS2Q96GW9 593 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 HSH2DQ96JZ2 352 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 KCTD14Q9BQ13 255 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 OR51B6Q9H340 312 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 MAN2C1Q9NTJ4 1040 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 TBCCD1Q9NVR7 557 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 SAMD4AQ9UPU9 718 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 ENPP4Q9Y6X5 453 aa12.31□□□□□ -0.44
HMGCS1-203ENST00000507004 TRAV27A0A087WT01 109 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 A0A1W2PPL8 197 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 A0A1W2PRQ8 180 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 NDUFB2O95178 105 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 SERPINA1P01009 418 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 ITGA2P17301 1181 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 RHCEP18577 417 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 MAKP20794 623 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 GATA3P23771 443 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 PRDX6P30041 224 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 YAP1P46937 504 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 GSK3BP49841 420 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 SMIM11AP58511 58 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 PPP1CBP62140 327 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 ERVK-25P63136 954 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 DGCR6Q14129 220 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 C8orf82Q6P1X6 216 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 IL17RELQ6ZVW7 336 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 USP51Q70EK9 711 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 ADCK1Q86TW2 530 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 KLF14Q8TD94 323 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 ZFAND2BQ8WV99 257 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 TSPAN32Q96QS1 320 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 NMNAT1Q9HAN9 279 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 POLE4Q9NR33 117 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 HIF1ANQ9NWT6 349 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 ABCD2Q9UBJ2 740 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 ATPIF1Q9UII2 106 aa12.3□□□□□ -0.44
HMGCS1-203ENST00000507004 LOC100509620A0A075B734 347 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 IGKV1D-43A0A0B4J1Z2 117 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 J3QLI3 93 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 NME4O00746 187 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 FFAR1O14842 300 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 ATP8B1O43520 1251 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 PRSS23O95084 383 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 H1F0P07305 194 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 CD55P08174 381 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 TNFSF4P23510 183 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 NUDT2P50583 147 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 MMP15P51511 669 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 ERVS71-1P61550 626 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 LMO4P61968 165 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 LSM6P62312 80 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 SF3A3Q12874 501 aaKnown RBP eCLIP12.29□□□□□ -0.445e-6■□□□□ 8
HMGCS1-203ENST00000507004 KRT72Q14CN4 511 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 ALKBH6Q3KRA9 238 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 DNM1P34Q6PK57 102 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 ZNF101Q8IZC7 436 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 OR13C2Q8NGS9 318 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 ABHD4Q8TB40 342 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 SLC25A40Q8TBP6 338 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 ZNF570Q96NI8 536 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 GPX7Q96SL4 187 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 WNT5BQ9H1J7 359 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 ZNF665Q9H7R5 613 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 SPAG4Q9NPE6 437 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 TREM2Q9NZC2 230 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 RHCGQ9UBD6 479 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
HMGCS1-203ENST00000507004 FBN1P35555 2871 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 A0A0G2JMP0 313 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 TEX13CA0A0J9YWL9 993 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 A0A0X1KG70 313 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 PRSS37A4D1T9 235 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 J3KTA2 159 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 SURF4O15260 269 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 CDC14BO60729 498 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 KHDRBS3O75525 346 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 ABHD16AO95870 558 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 PNPP00491 289 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 SDHAP31040 664 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 WNT5AP41221 380 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 RGS6P49758 472 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 RPS6KA3P51812 740 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 AQP6Q13520 282 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 ENDOGQ14249 297 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 MTX3Q5HYI7 312 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 RINLQ6ZS11 566 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 OR4M2Q8NGB6 313 aa12.28□□□□□ -0.44
HMGCS1-203ENST00000507004 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms