RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLC37A3Q8NCC5 494 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF555Q8NEP9 628 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 OR8D4Q8NGM9 314 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 OR4K13Q8NH42 304 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 TMEM163Q8TC26 289 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 ASB17Q8WXJ9 295 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 RASD2Q96D21 266 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 MBD6Q96DN6 1003 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 DNAJA3Q96EY1 480 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 NMNAT3Q96T66 252 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 PLA2G12AQ9BZM1 189 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 YIPF3Q9GZM5 350 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 TBCCD1Q9NVR7 557 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 IMPAD1Q9NX62 359 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 H2AFY2Q9P0M6 372 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-205ENST00000506880 CYB5R1Q9UHQ9 305 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 GPR160Q9UJ42 338 aa7.38□□□□□ -1.23
PDGFC-205ENST00000506880 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 OR6C68A6NDL8 312 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 PYCARD-AS1I3L0S3 204 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 C19orf84I3L1E1 186 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF254O75437 659 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 SOX14O95416 240 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 BAG2O95816 211 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 IGHV3-9P01782 118 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 B4GALT1P15291 398 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 SPI1P17947 270 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 PTNP21246 168 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 PRKACGP22612 351 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 EDNRAP25101 427 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 GRNP28799 593 aaKnown RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 APLNRP35414 380 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 GGT2P36268 569 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 ENTPD1P49961 510 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 SELENOVP59797 346 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 GRB2P62993 217 aaKnown RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 RAB35Q15286 201 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 TRIP10Q15642 601 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 ETFDHQ16134 617 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 SNCBQ16143 134 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 OCLNQ16625 522 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 CLEC12AQ5QGZ9 265 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 PHYHD1Q5SRE7 291 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF771Q7L3S4 317 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 IGFN1Q86VF2 1251 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 PROKR2Q8NFJ6 384 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 OR5L1Q8NGL2 311 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 OR2AJ1Q8NGZ0 328 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 OR4Q3Q8NH05 313 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 PIGTQ969N2 578 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF75AQ96N20 296 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 CDADC1Q9BWV3 514 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 SEMA6AQ9H2E6 1030 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 RPRD1BQ9NQG5 326 aaKnown RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 INPP5EQ9NRR6 644 aa7.37□□□□□ -1.23
PDGFC-205ENST00000506880 DDX28Q9NUL7 540 aaKnown RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 EIF3KQ9UBQ5 218 aaKnown RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 NOP16Q9Y3C1 178 aaKnown RBP7.37□□□□□ -1.23
PDGFC-205ENST00000506880 ARFGEF3Q5TH69 2177 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 LOC100130705A0A1B0GUX0 176 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SAC3D1A6NKF1 404 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 HS3ST1O14792 307 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SGCEO43556 437 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SLC2A10O95528 541 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF35P13682 527 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SLC2A5P22732 501 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 CFL1P23528 166 aaKnown RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 POU1F1P28069 291 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 LOXP28300 417 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 GSTT1P30711 240 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 HTR1FP30939 366 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 OTX1P32242 354 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 GLRXP35754 106 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ACTC1P68032 377 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ACTA1P68133 377 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 GALK2Q01415 458 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 NAAAQ02083 359 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 PPP1R8Q12972 351 aaKnown RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 MRPL28Q13084 256 aaKnown RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 CRMP1Q14194 572 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 EFNB3Q15768 340 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SGCAQ16586 387 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF672Q499Z4 452 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 HIKESHIQ53FT3 197 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 LINC01590Q5TEZ4 76 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ACSM5Q6NUN0 579 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 KCTD18Q6PI47 426 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 MEPCEQ7L2J0 689 aaKnown RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 CXXC5Q7LFL8 322 aaKnown RBP7.36□□□□□ -1.23
PDGFC-205ENST00000506880 KCTD20Q7Z5Y7 419 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 DTX2Q86UW9 622 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 WFDC8Q8IUA0 241 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SKA3Q8IX90 412 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 HS3ST5Q8IZT8 346 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 ZNF295-AS1Q8N0V1 137 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 LRRC75A-AS1Q8N1F1 130 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 DHRSXQ8N5I4 330 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 CCDC54Q8NEL0 328 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 SDR9C7Q8NEX9 313 aa7.36□□□□□ -1.23
PDGFC-205ENST00000506880 OR52N5Q8NH56 324 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms