RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 RANBP2P49792 3224 aaKnown RBP2□□□□□ -2.09
TOPBP1-205ENST00000506779 ATRXP46100 2492 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 FER1L5A0AVI2 2057 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A0J9YY10 115 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A1B0GTH9 108 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A1W2PPV9 198 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 A0A1W2PQ72 361 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 DHRS12A0PJE2 317 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GSAPA4D1B5 854 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR6C74A6NCV1 312 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LRIT2A6NDA9 550 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PRORSD1PA6NEY8 169 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 RPL37AP8A6NKH3 93 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR52A4PA6NMU1 304 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GABRR3A8MPY1 467 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 FOXI3A8MTJ6 420 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 C10orf142B7Z368 130 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GNGT2O14610 69 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CASQ2O14958 399 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SCAMP2O15127 329 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TOX3O15405 576 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 AQP9O43315 295 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NUDT21O43809 227 aaKnown RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 KIAA0513O60268 411 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GALR3O60755 368 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SERPINB7O75635 380 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PDE5AO76074 875 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SERPIND1P05546 499 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LYNP07948 512 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 RETP07949 1114 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR9G9P0C7N8 305 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GPX2P18283 190 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SDC1P18827 310 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CSNK2A2P19784 350 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TCN1P20061 433 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 HIST1H1TP22492 207 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 UQCRC2P22695 453 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 FASP25445 335 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PPP2R1BP30154 601 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NTSP30990 170 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 IFNA8P32881 189 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CHI3L1P36222 383 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SSR2P43308 183 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 UCP2P55851 309 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CSNK1G2P78368 415 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 REEP5Q00765 189 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CHRNB3Q05901 458 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SIGLEC14Q08ET2 396 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 C2orf80Q0P641 193 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 FADDQ13158 208 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SLAMF1Q13291 335 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PDE7AQ13946 482 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 FZD2Q14332 565 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GK3PQ14409 553 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 RCN1Q15293 331 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SGCBQ16585 318 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CLPPQ16740 277 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NDUFA9Q16795 377 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CYP51A1Q16850 503 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF630Q2M218 657 aaPredicted RBP1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ADPRMQ3LIE5 342 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF528Q3MIS6 628 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF506Q5JVG8 444 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LEMD1Q68G75 181 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GLYATQ6IB77 296 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LCN8Q6JVE9 175 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SPESP1Q6UW49 350 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 DLEU7Q6UYE1 221 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 B3GLCTQ6Y288 498 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 Q6ZS52 159 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF621Q6ZSS3 439 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 TMEM26Q6ZUK4 368 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 Q7L0L9 218 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 COMMD6Q7Z4G1 85 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 DHDDSQ86SQ9 333 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC22A16Q86VW1 577 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 IFNEQ86WN2 208 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 RIMKLAQ8IXN7 391 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PARP8Q8N3A8 854 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 KRTCAP2Q8N6L1 136 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 C10orf53Q8N6V4 93 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 PACRGLQ8N7B6 248 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 GVQW1Q8N7I0 195 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ARL10Q8N8L6 244 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ACOT4Q8N9L9 421 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LINC01555Q8NAE3 123 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 MFSD9Q8NBP5 474 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 ICA1LQ8NDH6 482 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR2L5Q8NG80 312 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4A15Q8NGL6 344 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR9I1Q8NGQ6 314 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR1K1Q8NGR3 316 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4F5Q8NH21 305 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4A16Q8NH70 328 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 OR10G6Q8NH81 332 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 CDC26Q8NHZ8 85 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NT5CQ8TCD5 201 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 LMX1AQ8TE12 382 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 C16orf78Q8WTQ4 265 aa1.99□□□□□ -2.09
TOPBP1-205ENST00000506779 NAT14Q8WUY8 206 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms