RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PMPCAQ10713 525 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 FCRL6Q6DN72 434 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 FBXO42Q6P3S6 717 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 FDX2Q6P4F2 183 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 CORO6Q6QEF8 472 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 CD163Q86VB7 1156 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 TMEM52Q8NDY8 209 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 OR6N2Q8NGY6 317 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 HIST1H2BAQ96A08 127 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 INTS12Q96CB8 462 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 SAT2Q96F10 170 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 SMIM8Q96KF7 97 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 HDAC8Q9BY41 377 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 PCDHGA1Q9Y5H4 931 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 A0A0A6YYH2 397 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 A6NJ64 397 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 RNASEK-C17orf49H0YIS7 233 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 BLOC1S5-TXNDC5H3BN57 136 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 TO15178 435 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 GUSBP08236 651 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 CD37P11049 281 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 ADH5P11766 374 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 HTR2CP28335 458 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 RPS27P42677 84 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 SLC6A9P48067 706 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 PPT1P50897 306 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 ADAM8P78325 824 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 PSG6Q00889 435 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 RBM39Q14498 530 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 ZSCAN4Q8NAM6 433 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 RCBTB1Q8NDN9 531 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 RAB7BQ96AH8 199 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 C14orf79Q96F83 325 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 GAL3ST1Q99999 423 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 NMES1Q9C002 83 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 ZBP1Q9H171 429 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 HRH4Q9H3N8 390 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 ZMAT3Q9HA38 289 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 HIF3AQ9Y2N7 669 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 COL4A2P08572 1712 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 IGKV1D-42A0A075B6H8 117 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 EFCAB7A8K855 629 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 DUS4LO95620 317 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 GPR75O95800 540 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 IFI6P09912 130 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 RCC1P18754 421 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 ARRB1P49407 418 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 F2RL1P55085 397 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 SKP1P63208 163 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 MOGAT2Q3SYC2 334 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF584Q8IVC4 421 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 ADAMTS17Q8TE56 1095 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 CLCC1Q96S66 551 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 AMELYQ99218 206 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 SLC17A9Q9BYT1 436 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 CAPN10Q9HC96 672 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 GHRLQ9UBU3 117 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 HEATR5AQ86XA9 2040 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF860A6NHJ4 632 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 LDLRAD4O15165 306 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 CD5P06127 495 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 HGFACQ04756 655 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 ELAVL1Q15717 326 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 RNASE10Q5GAN6 216 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 TMEM225Q6GV28 225 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 KCTD9Q7L273 389 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 SLC29A4Q7RTT9 530 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF561Q8N587 486 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 OR4N2Q8NGD1 307 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 OR2A5Q96R48 311 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 LYRM4Q9HD34 91 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 ASH2LQ9UBL3 628 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 MRPS18BQ9Y676 258 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 TMEM14AQ9Y6G1 99 aa15.41■□□□□ 0.06
SQSTM1-211ENST00000506690 MPDZO75970 2070 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 A0A1W2PPE3 182 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 H0YIZ8 118 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 EFSO43281 561 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 TXNDC12O95881 172 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 FABP9Q0Z7S8 132 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF141Q15928 474 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 GLYATL3Q5SZD4 288 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 PHF19Q5T6S3 580 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 ADGRE4PQ86SQ3 457 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 TMEFF1Q8IYR6 380 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 OR4E2Q8NGC2 313 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 OR52R1Q8NGF1 315 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 CASTOR1Q8WTX7 329 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 SLC39A7Q92504 469 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 C3orf49Q96BT1 292 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 NAA11Q9BSU3 229 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 LAT2Q9GZY6 243 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 INSL6Q9Y581 213 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 NOTCH4Q99466 2003 aa15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 LAMA2P24043 3122 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-211ENST00000506690 PMS2P1A4D2B8 440 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 C5orf51A6NDU8 294 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 TMEM235A6NFC5 223 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 FAM157AC9JC47 383 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms