RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 TDRD6O60522 2096 aaKnown RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 A0A0D9SG52 128 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 GPR31O00270 319 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 RENP00797 406 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 RNH1P13489 461 aaKnown RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 HOXB2P14652 356 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 ADCYAP1P18509 176 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 HTR2CP28335 458 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 CENPAP49450 140 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 CAPZA1P52907 286 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 ACTBP60709 375 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 PPIAP62937 165 aaKnown RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 ACTG1P63261 375 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 INSM1Q01101 510 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 SRSF4Q08170 494 aaKnown RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 PRTGQ2VWP7 1150 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 EMC4Q5J8M3 183 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 BPIFB2Q8N4F0 458 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 RNF128Q8TEB7 428 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 C8orf44Q96CB5 159 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 SLC17A5Q9NRA2 495 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 ATG2AQ2TAZ0 1938 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 PRUNE2Q8WUY3 3088 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 OR14I1A6ND48 311 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 ABCD4O14678 606 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 LDLRAD4O15165 306 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 BCL2L11O43521 198 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 HLA-AP01891 365 aaKnown RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 IGFBP3P17936 291 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 RAB3AP20336 220 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 STARP49675 285 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 PMPCAQ10713 525 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 CLVS2Q5SYC1 327 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 C3orf33Q6P1S2 294 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 TMEM88Q6PEY1 159 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 Q6ZSR6 202 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 ZNF679Q8IYX0 411 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 PRR22Q8IZ63 422 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 OR1S2Q8NGQ3 325 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 CCDC107Q8WV48 283 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 CMBLQ96DG6 245 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 NARS2Q96I59 477 aaKnown RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 CYYR1Q96J86 154 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 ZNF471Q9BX82 626 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 POTEKPQ9BYX7 375 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 NXF5Q9H1B4 397 aaKnown RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 SAV1Q9H4B6 383 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 UBQLN4Q9NRR5 601 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 GPN3Q9UHW5 284 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 TMED7Q9Y3B3 224 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 TMEM14AQ9Y6G1 99 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 LOC101059948A0A1B0GTJ6 334 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 ZNF264O43296 627 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 CD74P04233 296 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SPARCP09486 303 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 CTLA4P16410 223 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 CD34P28906 385 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 AVPR2P30518 371 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SRSF3P84103 164 aaKnown RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SSBP1Q04837 148 aaKnown RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SPOCK1Q08629 439 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 FAM109BQ6ICB4 259 aaPredicted RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 RHOUQ7L0Q8 258 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 GVQW1Q8N7I0 195 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 ADAM19Q9H013 955 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 CST11Q9H112 138 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 HPF1Q9NWY4 346 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 GMEB2Q9UKD1 530 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 DHDHQ9UQ10 334 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 RHBDD3Q9Y3P4 386 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 ZNF736B4DX44 427 aaPredicted RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 UTS2O95399 124 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 KLF8O95600 359 aaPredicted RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 BGLAPP02818 100 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 GUCA2BQ16661 112 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 MARCH3Q86UD3 253 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 ZNF440Q8IYI8 595 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 OR13H1Q8NG92 308 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 CMKLR1Q99788 373 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 MYOZ1Q9NP98 299 aaPredicted RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 PURGQ9UJV8 347 aaKnown RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 PCDHB10Q9UN67 800 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 PLEKHA6Q9Y2H5 1048 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 NOP16Q9Y3C1 178 aaKnown RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 KANTRA0A1W2PQU2 76 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SULT2B1O00204 365 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SLC16A7O60669 478 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 CD37P11049 281 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SLC25A4P12235 298 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 HPGDP15428 266 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 HNRNPA2B1P22626 353 aaKnown RBP10.68□□□□□ -0.7
UBE3D-206ENST00000505226 ZBTB25P24278 435 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 BDKRB2P30411 391 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 AGTR1P30556 359 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 ZNF345Q14585 488 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 SHEQ5VZ18 495 aa10.68□□□□□ -0.7
UBE3D-206ENST00000505226 OR52W1Q6IF63 320 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms