RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SLC9A3P48764 834 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 ERFP50548 548 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 NUDT2P50583 147 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 MVKQ03426 396 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 HSF2Q03933 536 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 TRAM2Q15035 370 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 TSTQ16762 297 aaKnown RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 IFI44LQ53G44 452 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 RINLQ6ZS11 566 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 DPPA2Q7Z7J5 298 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 OAFQ86UD1 273 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 GEMIN6Q8WXD5 167 aaKnown RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 ACOT11Q8WXI4 607 aaPredicted RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 RASD2Q96D21 266 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 FAM46AQ96IP4 442 aaKnown RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 C7orf34Q96L11 122 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 ELAC2Q9BQ52 826 aaKnown RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 ALG12Q9BV10 488 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 OR2J1Q9GZK6 312 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 NMNAT1Q9HAN9 279 aaPredicted RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 POLE4Q9NR33 117 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 NDUFAF4Q9P032 175 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 TMEFF2Q9UIK5 374 aaPredicted RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 TRBV4-1A0A0J9YWV2 114 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 SLC22A23A1A5C7 686 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 PPIHO43447 177 aaKnown RBP11.15□□□□□ -0.62
DDX41-204ENST00000504807 PTP4A3O75365 173 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 DEAF1O75398 565 aaPredicted RBP11.15□□□□□ -0.62
DDX41-204ENST00000504807 SEMG1P04279 462 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 CST2P09228 141 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 GAAP10253 952 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 CTLA4P16410 223 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 APLNRP35414 380 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 OMPP47874 163 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 DVL1P1P54792 670 aaPredicted RBP11.15□□□□□ -0.62
DDX41-204ENST00000504807 PSME3P61289 254 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 HACD2Q6Y1H2 254 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 ZNF730Q6ZMV8 503 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 TMPRSS11FQ6ZWK6 438 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 ZNF771Q7L3S4 317 aaPredicted RBP11.15□□□□□ -0.62
DDX41-204ENST00000504807 ARPINQ7Z6K5 226 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 KLF14Q8TD94 323 aaPredicted RBP11.15□□□□□ -0.62
DDX41-204ENST00000504807 SLC7A6Q92536 515 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 C1orf198Q9H425 327 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 CCNB1IP1Q9NPC3 277 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 ENPP4Q9Y6X5 453 aa11.15□□□□□ -0.62
DDX41-204ENST00000504807 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 SPRY3O43610 288 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 ICMTO60725 284 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 DRD4P21917 467 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 LSP1P33241 339 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 MSX2P35548 267 aaPredicted RBP11.14□□□□□ -0.63
DDX41-204ENST00000504807 CRYBB2P43320 205 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 RAD52P43351 418 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 MRPS11P82912 194 aaKnown RBP11.14□□□□□ -0.63
DDX41-204ENST00000504807 PLP2Q04941 152 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 Q6ZR03 302 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 PTCHD4Q6ZW05 846 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 USP51Q70EK9 711 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 FKBP9P1Q75LS8 142 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 HDDC2Q7Z4H3 204 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 ABHD4Q8TB40 342 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 C11orf40Q8WZ69 217 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 HOPXQ9BPY8 73 aaPredicted RBP11.14□□□□□ -0.63
DDX41-204ENST00000504807 KCTD14Q9BQ13 255 aaPredicted RBP11.14□□□□□ -0.63
DDX41-204ENST00000504807 BCL2L14Q9BZR8 327 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 MRGBPQ9NV56 204 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 KLHL21Q9UJP4 597 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 SIGLEC7Q9Y286 467 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 PCDHGB1Q9Y5G3 927 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 V9GYQ6 96 aa11.14□□□□□ -0.63
DDX41-204ENST00000504807 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 DCTN6O00399 190 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 GSTA4O15217 222 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 CCDC22O60826 627 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 UBOX5O94941 541 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 MSMBP08118 114 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 CD14P08571 375 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 MSR1P21757 451 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 ANOS1P23352 680 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 GDI2P50395 445 aaKnown RBP11.13□□□□□ -0.63
DDX41-204ENST00000504807 ZNF81P51508 661 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 GYS2P54840 703 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 TMEM33P57088 247 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 PPP1CBP62140 327 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 TAF11Q15544 211 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 ZBED5Q49AG3 693 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 MBNL2Q5VZF2 373 aaKnown RBP11.13□□□□□ -0.63
DDX41-204ENST00000504807 OR1J2Q8NGS2 313 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 LZICQ8WZA0 190 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 FAM162AQ96A26 154 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 TMEM186Q96B77 213 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 DHRS1Q96LJ7 313 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 TSSK2Q96PF2 358 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 EFCAB1Q9HAE3 211 aa11.13□□□□□ -0.63
DDX41-204ENST00000504807 MSL2Q9HCI7 577 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms