RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 FAM183AA6NL82 134 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 C12orf71A8MTZ7 269 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 PRR23D1E9PI22 279 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 MPZL1O95297 269 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 RAB36O95755 333 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 CD3EP07766 207 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 PATE4P0C8F1 98 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 PRR23D2P0DMB1 279 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF14P17017 642 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNF32P17041 273 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 SPI1P17947 270 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 PYCR1P32322 319 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 CENPAP49450 140 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 IDH3GP51553 393 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 BLVRAP53004 296 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 FBXW10Q5XX13 1052 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 UGT2A3Q6UWM9 527 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 PACRGLQ8N7B6 248 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 PROKR2Q8NFJ6 384 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 OR9Q1Q8NGQ5 310 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 C11orf40Q8WZ69 217 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 RADILQ96JH8 1075 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 HRASLS5Q96KN8 279 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 RDH12Q96NR8 316 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 FOXN4Q96NZ1 517 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 CLEC4MQ9H2X3 399 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 RNF121Q9H920 327 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 MED20Q9H944 212 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 RNPEPL1Q9HAU8 725 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 EMC7Q9NPA0 242 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 CCNB1IP1Q9NPC3 277 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 HINT3Q9NQE9 182 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 NKX1-2Q9UD57 310 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 MOKQ9UQ07 419 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 RNF115Q9Y4L5 304 aa10.35□□□□□ -0.75
PDLIM5-208ENST00000504489 TACC2O95359 2948 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 ARID1AO14497 2285 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 FAM171A2A8MVW0 826 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 ABCD4O14678 606 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 PRODHO43272 600 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 PRKYO43930 277 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 GPANK1O95872 356 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 PTHP01270 115 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 TFP02787 698 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 SERPINA5P05154 406 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 GYPBP06028 91 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 CELA3BP08861 270 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 CECR9P0C854 216 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 CLUP10909 449 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 PEX2P28328 305 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 FMO3P31513 532 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 TEKQ02763 1124 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 PLP2Q04941 152 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 SLC34A1Q06495 639 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 DBPQ10586 325 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 RIPK1Q13546 671 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 ZIK1Q3SY52 487 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 OGFRL1Q5TC84 451 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 LINC01590Q5TEZ4 76 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 LPCAT4Q643R3 524 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 ADAM5Q6NVV9 412 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 PLBD1Q6P4A8 553 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 CXXC5Q7LFL8 322 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 TMEM200AQ86VY9 491 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 CDC20BQ86Y33 519 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 CPOQ8IVL8 374 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 ZNRF4Q8WWF5 429 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 MBOAT4Q96T53 435 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 HCAR1Q9BXC0 346 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 C1orf198Q9H425 327 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 TOR3AQ9H497 397 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 KCNG2Q9UJ96 466 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 TIMM10BQ9Y5J6 103 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 FBN2P35556 2912 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 NBPF19A0A087WUL8 3843 aa10.34□□□□□ -0.75
PDLIM5-208ENST00000504489 A0A1W2PPR1 153 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 DLGAP1O14490 977 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 GLCEO94923 617 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 SNAP29O95721 258 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 PLAUP00749 431 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 HLA-DQA2P01906 255 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 CRYAAP02489 173 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC2A5P22732 501 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 GGT2P36268 569 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 HIST1H3AP68431 136 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 PSG4Q00888 419 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 NAAAQ02083 359 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 SCRN3Q0VDG4 424 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 AQP6Q13520 282 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 RAB39AQ14964 217 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 MEP1BQ16820 701 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 LRRC36Q1X8D7 754 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 PABPC1L2AQ5JQF8 200 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 SLC35D3Q5M8T2 416 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 HIST2H3PS2Q5TEC6 136 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF704Q6ZNC4 412 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 HIST2H3AQ71DI3 136 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 ZNF584Q8IVC4 421 aa10.33□□□□□ -0.76
PDLIM5-208ENST00000504489 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms