RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ZNF726A6NNF4 738 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF99A8MXY4 864 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 HNRNPCL3B7ZW38 293 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 C5orf58C9J3I9 102 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MS4A18H0YCH9 400 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 RPL36A-HNRNPH2H7BZ11 118 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 AIM2O14862 343 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 TIMM23O14925 209 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 RGS16O15492 202 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 TRAF3IP2O43734 574 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 TPST1O60507 370 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 KNG1P01042 644 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 LCKP06239 509 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 HNRNPCL4P0DMR1 293 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ACHEP22303 614 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 PCGF2P35227 344 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 GLRXP35754 106 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ERVS71-1P61550 626 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 CCL8P80075 99 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MYBPC1Q00872 1141 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 BST1Q10588 318 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 BNIP1Q12981 228 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 BAMBIQ13145 260 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 CBX3Q13185 183 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 PMS2P3Q13401 168 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MELKQ14680 651 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MFSD13AQ14CX5 517 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 SNCBQ16143 134 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 TSTQ16762 297 aaKnown RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MS4A18Q3C1V0 323 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 C3orf36Q3SXR2 165 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ALG10BQ5I7T1 473 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 RNF220Q5VTB9 566 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 SLC2A7Q6PXP3 512 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 UGT2A3Q6UWM9 527 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 H1FNTQ75WM6 255 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 DOK3Q7L591 496 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 COMTD1Q86VU5 262 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 SKA3Q8IX90 412 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 BCL6BQ8N143 479 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 OR9I1Q8NGQ6 314 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 NFKBIDQ8NI38 313 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 GTF3AQ92664 365 aaKnown RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 SLC38A4Q969I6 547 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 BOD1Q96IK1 185 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF48Q96MX3 618 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ZIM3Q96PE6 472 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 FOXB1Q99853 325 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ULBP2Q9BZM5 246 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ROPN1BQ9BZX4 212 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MS4A5Q9H3V2 200 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 RNF121Q9H920 327 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MEAF6Q9HAF1 191 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 ROPN1Q9HAT0 212 aaPredicted RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 B3GAT2Q9NPZ5 323 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 B3GNT2Q9NY97 397 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MBD2Q9UBB5 411 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 LAMP5Q9UJQ1 280 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 FBXL7Q9UJT9 491 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 RCE1Q9Y256 329 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 MMP24Q9Y5R2 645 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 GPR45Q9Y5Y3 372 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 CACNG2Q9Y698 323 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 HUWE1Q7Z6Z7 4374 aaKnown RBP4.69□□□□□ -1.66
SPTA1-209ENST00000498708 DSPPQ9NZW4 1301 aa4.69□□□□□ -1.66
SPTA1-209ENST00000498708 IGKV1D-42A0A075B6H8 117 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 TRAV36DV7A0A075B6V5 113 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 A0A087WUJ7 227 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 TRAV20A0A0B4J274 112 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ISPDA4D126 451 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 PLPP2O43688 288 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 OR2T1O43869 369 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 FZD7O75084 574 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 SLC22A3O75751 556 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 DNAJC8O75937 253 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 MPZL1O95297 269 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ECDO95905 644 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 TFP02787 698 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 BGLAPP02818 100 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF35P13682 527 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ZNF14P17017 642 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 CCNOP22674 350 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 HTR2AP28223 471 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 AQP1P29972 269 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 LSP1P33241 339 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 CSNK1A1P48729 337 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ETV1P50549 477 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 BIDP55957 195 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 NCALDP61601 193 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 LMO4P61968 165 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 MRPS15P82914 257 aaKnown RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 RBBP4Q09028 425 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 ZP4Q12836 540 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 RGNQ15493 299 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 SLC9A3R2Q15599 337 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 OR1Q1Q15612 314 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 SLC9B1Q4ZJI4 515 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 BEND6Q5SZJ8 279 aaPredicted RBP4.68□□□□□ -1.66
SPTA1-209ENST00000498708 SLC35F1Q5T1Q4 408 aa4.68□□□□□ -1.66
SPTA1-209ENST00000498708 FAM69AQ5T7M9 428 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms