RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PSKH1P11801 424 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF32P17041 273 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 ATP6V1E1P36543 226 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 ISL1P61371 349 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 PIGFQ07326 219 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 GGTLC2Q14390 218 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 PPA1Q15181 289 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 TAB1Q15750 504 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 GSG1Q2KHT4 349 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 TIMM23BQ5SRD1 257 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 TMEM53Q6P2H8 277 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 CORO6Q6QEF8 472 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 CLEC18BQ6UXF7 455 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 MDP1Q86V88 176 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 SKA3Q8IX90 412 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 CLEC18CQ8NCF0 446 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 OR2AJ1Q8NGZ0 328 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 MUCL1Q96DR8 90 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 RNFT2Q96EX2 444 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 TEAD3Q99594 435 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 CDADC1Q9BWV3 514 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 OR10A4Q9H209 315 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 NOX3Q9HBY0 568 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 LHFPL6Q9Y693 200 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 ICE1Q9Y2F5 2266 aa11.86□□□□□ -0.51
CPNE1-227ENST00000498056 TENM4Q6N022 2769 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 ARPC4-TTLL3A0A0A6YYG9 625 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 TUBAL3A6NHL2 446 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 PPP3CBP16298 524 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 MTNR1AP48039 350 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 PCBD1P61457 104 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 LSM6P62312 80 aaKnown RBP11.85□□□□□ -0.51
CPNE1-227ENST00000498056 SCRN3Q0VDG4 424 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 POU4F2Q12837 409 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 CDK5R2Q13319 367 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 EIF2B1Q14232 305 aaKnown RBP11.85□□□□□ -0.51
CPNE1-227ENST00000498056 KCNMB1Q16558 191 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 SLC25A30Q5SVS4 291 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 FAM27BQ5VT28 67 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 TMEM154Q6P9G4 183 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 SLC35F2Q8IXU6 374 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 TIGD4Q8IY51 512 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 WDR31Q8NA23 367 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 FGFBP3Q8TAT2 258 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 SMAP2Q8WU79 429 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-227ENST00000498056 FBXO17Q96EF6 278 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 TBX5Q99593 518 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 C1QTNF6Q9BXI9 259 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 ADGRL4Q9HBW9 690 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 OBP2BQ9NPH6 170 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF224Q9NZL3 707 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 KCNG2Q9UJ96 466 aa11.85□□□□□ -0.51
CPNE1-227ENST00000498056 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 SLC1A7O00341 560 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF593O00488 134 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 XPNPEP2O43895 674 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF83P51522 516 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 IDH3GP51553 393 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 TMED1Q13445 227 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 MED21Q13503 144 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 SLC18B1Q6NT16 456 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 CFAP77Q6ZQR2 320 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 DPY19L4Q7Z388 723 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 DCXRQ7Z4W1 244 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 DPPA2Q7Z7J5 298 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 P2RY8Q86VZ1 359 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 ZNF786Q8N393 782 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 RFLNBQ8N5W9 214 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 BPIFB6Q8NFQ5 453 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 OR10H4Q8NGA5 316 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 OR4F15Q8NGB8 312 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 AKR7LQ8NHP1 331 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 LINC01560Q8TB33 94 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 FBLIM1Q8WUP2 373 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 USB1Q9BQ65 265 aaKnown RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 RHNO1Q9BSD3 238 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 MARCH7Q9H992 704 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 NDRG3Q9UGV2 375 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 GDF2Q9UK05 429 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 RPL36Q9Y3U8 105 aaKnown RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 PCDHGB5Q9Y5G0 923 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 KLF2Q9Y5W3 355 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 SLC25A15Q9Y619 301 aa11.84□□□□□ -0.51
CPNE1-227ENST00000498056 HELZ2Q9BYK8 2649 aaKnown RBP11.84□□□□□ -0.51
CPNE1-227ENST00000498056 M0R1B8 84 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 RER1O15258 196 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 SGCEO43556 437 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 TMCC2O75069 709 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 MMP7P09237 267 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-227ENST00000498056 SBK2P0C263 348 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 ARR3P36575 388 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 HTR5AP47898 357 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 RAB1AP62820 205 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 PABPC1L2AQ5JQF8 200 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 LAIR2Q6ISS4 152 aa11.83□□□□□ -0.52
CPNE1-227ENST00000498056 ZNF774Q6NX45 483 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms