RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SPAG6O75602 509 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 F2RP25116 425 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 SSTR5P35346 364 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 SSR4P51571 173 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 C6orf226Q5I0X4 101 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 AVPI1Q5T686 147 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 SAXO2Q658L1 398 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 DNAJC24Q6P3W2 148 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 SPINT4Q6UDR6 99 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 TMEM205Q6UW68 189 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 PDIK1LQ8N165 341 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 HSD17B11Q8NBQ5 300 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 APCDD1LQ8NCL9 501 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 OR13G1Q8NGZ3 307 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 CIRBP-AS1Q8TBR5 109 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 CXorf40AQ8TE69 158 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 ZCCHC13Q8WW36 166 aaKnown RBP1.51□□□□□ -2.17
SMC4-227ENST00000497984 CNDP1Q96KN2 507 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 TBL1YQ9BQ87 522 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 SGK2Q9HBY8 427 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 KLHL28Q9NXS3 571 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 ZNF639Q9UID6 485 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 CARHSP1Q9Y2V2 147 aaKnown RBP1.51□□□□□ -2.17
SMC4-227ENST00000497984 ATP6V0A2Q9Y487 856 aa1.51□□□□□ -2.17
SMC4-227ENST00000497984 NID2Q14112 1375 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 KANK1Q14678 1352 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 IGHV3OR16-8A0A075B7F1 116 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 IGKV2-24A0A0C4DH68 120 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 F6UB75 175 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 K7EM74 188 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 LGALS9O00182 355 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 IGHDP01880 384 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 ZNF735P0CB33 412 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 ATP1B2P14415 290 aaPredicted RBP1.5□□□□□ -2.17
SMC4-227ENST00000497984 DCKP27707 260 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 CASP14P31944 242 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 IFNA8P32881 189 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 CRYBB2P43320 205 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 KCNJ2P63252 427 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 MRPS22P82650 360 aaKnown RBP1.5□□□□□ -2.17
SMC4-227ENST00000497984 TWF1Q12792 350 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 IFT88Q13099 833 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 ZSCAN26Q16670 478 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 METTL21CQ5VZV1 264 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 PLET1Q6UQ28 207 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 UQCC3Q6UW78 93 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 SPANXA2-OT1Q8N9U9 137 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 OR52M1Q8NGK5 317 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 PIFOQ8TCI5 191 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 C12orf42Q96LP6 360 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 TCEANC2Q96MN5 208 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 SERPINB12Q96P63 405 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 ZNF586Q9NXT0 402 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 ENOPH1Q9UHY7 261 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 UBIAD1Q9Y5Z9 338 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 SHROOM3Q8TF72 1996 aa1.5□□□□□ -2.17
SMC4-227ENST00000497984 OR52A4PA6NMU1 304 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 ZNF716A6NP11 495 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 H0YJW9 148 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 DNASE2O00115 360 aaPredicted RBP1.49□□□□□ -2.17
SMC4-227ENST00000497984 ZNF688P0C7X2 276 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 ETS2P15036 469 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 KITLGP21583 273 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 SEC61GP60059 68 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 UBE2NP61088 152 aaKnown RBP1.49□□□□□ -2.17
SMC4-227ENST00000497984 CDH17Q12864 832 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 ECH1Q13011 328 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 QPRTQ15274 297 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 PTPN20Q4JDL3 420 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 LRRC23Q53EV4 343 aaPredicted RBP1.49□□□□□ -2.17
SMC4-227ENST00000497984 WDFY1Q8IWB7 410 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 PTX4Q96A99 478 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 TIMM17AQ99595 171 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 VCX2Q9H322 139 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 OR52D1Q9H346 318 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 CWH43Q9H720 699 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 EXOSC4Q9NPD3 245 aaKnown RBP1.49□□□□□ -2.17
SMC4-227ENST00000497984 IKZF2Q9UKS7 526 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 BLOC1S6Q9UL45 172 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 ING4Q9UNL4 249 aa1.49□□□□□ -2.17
SMC4-227ENST00000497984 NLRC5Q86WI3 1866 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 C16orf90A8MZG2 172 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 H0YCG3 227 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 CDC7O00311 574 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 DPM1O60762 260 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 EEDO75530 441 aaKnown RBP1.48□□□□□ -2.17
SMC4-227ENST00000497984 P0C880 135 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 OR5H8P0DN80 308 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 UBE2HP62256 183 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 MXD1Q05195 221 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 GK3PQ14409 553 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 SPIN3Q5JUX0 258 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 SNX20Q7Z614 316 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 EGFL6Q8IUX8 553 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 EID2Q8N6I1 236 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 TEX9Q8N6V9 391 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 OR1L6Q8NGR2 347 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 OR6N1Q8NGY5 312 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 ZNF488Q96MN9 340 aa1.48□□□□□ -2.17
SMC4-227ENST00000497984 LHX5Q9H2C1 402 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms