RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 CBR1P16152 277 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 CRYGSP22914 178 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 NAA10P41227 235 aaPredicted RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 IDH3GP51553 393 aaPredicted RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 CDH11P55287 796 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 LSM6P62312 80 aaKnown RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 RAB39AQ14964 217 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 KCNMB1Q16558 191 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 SLC35D3Q5M8T2 416 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 LINC01590Q5TEZ4 76 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 LCN1P1Q5VSP4 162 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 ZNF691Q5VV52 312 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 NXNL2Q5VZ03 156 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 CORO6Q6QEF8 472 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 SEZ6L2Q6UXD5 910 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 MEPCEQ7L2J0 689 aaKnown RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 ERI1Q8IV48 349 aaKnown RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 ACBD4Q8NC06 268 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 AKR7LQ8NHP1 331 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 TRUB1Q8WWH5 349 aaKnown RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 PIK3IP1Q96FE7 263 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 ZNF582Q96NG8 517 aaPredicted RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 TEAD3Q99594 435 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 NGBQ9NPG2 151 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 B3GNT2Q9NY97 397 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 COMMD3-BMI1R4GMX3 469 aa10.37□□□□□ -0.75
CUX1-210ENST00000497815 HELZ2Q9BYK8 2649 aaKnown RBP10.37□□□□□ -0.75
CUX1-210ENST00000497815 IGHV1-18A0A0C4DH31 117 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 H0YAE9 185 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 H0YJX3 145 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 ZNF593O00488 134 aaPredicted RBP10.36□□□□□ -0.75
CUX1-210ENST00000497815 SELENOFO60613 162 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 APOL3O95236 402 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 HRGP04196 525 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 MMP7P09237 267 aaPredicted RBP10.36□□□□□ -0.75
CUX1-210ENST00000497815 PSKH1P11801 424 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 ARR3P36575 388 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 ENTPD1P49961 510 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 BLVRAP53004 296 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 PCBD1P61457 104 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 SNRPGP62308 76 aaKnown RBP10.36□□□□□ -0.75
CUX1-210ENST00000497815 AQP6Q13520 282 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 PABPC1L2AQ5JQF8 200 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 ZNF774Q6NX45 483 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 TMEM154Q6P9G4 183 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 DPPA2Q7Z7J5 298 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 MYPOPQ86VE0 399 aaPredicted RBP10.36□□□□□ -0.75
CUX1-210ENST00000497815 GID4Q8IVV7 300 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 SETD9Q8NE22 299 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 OR6N2Q8NGY6 317 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 OR2AJ1Q8NGZ0 328 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 SMAP2Q8WU79 429 aaPredicted RBP10.36□□□□□ -0.75
CUX1-210ENST00000497815 TFAP2CQ92754 450 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 PLPPR2Q96GM1 343 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 INTS14Q96SY0 518 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 OR2H1Q9GZK4 316 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 SLC24A3Q9HC58 644 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 CLN6Q9NWW5 311 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 KCNN3Q9UGI6 736 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 TIMM10BQ9Y5J6 103 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 LHFPL6Q9Y693 200 aa10.36□□□□□ -0.75
CUX1-210ENST00000497815 CACNA1CQ13936 2221 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 ALPK2Q86TB3 2170 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 IQCMA0A1B0GVH7 501 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.35□□□□□ -0.75
CUX1-210ENST00000497815 DPRXA6NFQ7 191 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SLC22A31A6NKX4 558 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 DEFB108AA8MXU0 73 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 RER1O15258 196 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SIAH2O43255 324 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 MPZL2O60487 215 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 CECR9P0C854 216 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 CCL2P13500 99 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 GABRB1P18505 474 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 HTR1FP30939 366 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 NUDT6P53370 316 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 HCCSP53701 268 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 PSG4Q00888 419 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 PLP2Q04941 152 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 BSPH1Q075Z2 132 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SPOCK1Q08629 439 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SCRN3Q0VDG4 424 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 IL18R1Q13478 541 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 MAD2L1BPQ15013 274 aaPredicted RBP10.35□□□□□ -0.75
CUX1-210ENST00000497815 MEDAGQ5VYS4 303 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 ZNF787Q6DD87 383 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SLC18B1Q6NT16 456 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 TMEM108Q6UXF1 575 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 CFAP77Q6ZQR2 320 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SPATC1Q76KD6 591 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SHFQ7M4L6 423 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 SSX8Q7RTT4 187 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 DPY19L4Q7Z388 723 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 ZNF584Q8IVC4 421 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 C8orf59Q8N0T1 100 aaPredicted RBP10.35□□□□□ -0.75
CUX1-210ENST00000497815 OR51G2Q8NGK0 314 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 RHOXF1Q8NHV9 184 aa10.35□□□□□ -0.75
CUX1-210ENST00000497815 CNIH3Q8TBE1 160 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms