RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TMEM246Q9BRR3 403 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 ACTR6Q9GZN1 396 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 TMEM185BQ9H7F4 350 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 PTGES2Q9H7Z7 377 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 HRASLSQ9HDD0 168 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 PLSCR3Q9NRY6 295 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 CKLFQ9UBR5 152 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 FBXL3Q9UKT7 428 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 EMC9Q9Y3B6 208 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 PTRH2Q9Y3E5 179 aaKnown RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 CHCHD2Q9Y6H1 151 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 KIAA1549Q9HCM3 1950 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 SLC17A2O00624 439 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 GLSO94925 669 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 UMODP07911 640 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 TMIGD3P0DMS9 266 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 COX6A1P12074 109 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 ACHEP22303 614 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 MC2RQ01718 297 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 SNTA1Q13424 505 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 FCN2Q15485 313 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 RAB11BQ15907 218 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 EXT1Q16394 746 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 OLFML2AQ68BL7 652 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 ASPHD2Q6ICH7 369 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 DEGS2Q6QHC5 323 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 CDH24Q86UP0 819 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 DEFB123Q8N688 67 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 NOXO1Q8NFA2 376 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 OR10H5Q8NGA6 315 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 OR56B4Q8NH76 319 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 ZFAND1Q8TCF1 268 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 ASB5Q8WWX0 329 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 EMC6Q9BV81 110 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 GTPBP2Q9BX10 602 aaKnown RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 ZNF700Q9H0M5 742 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 C20orf85Q9H1P6 137 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 OR51J1Q9H342 316 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 MRPL15Q9P015 296 aaKnown RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 PISDQ9UG56 409 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 CDV3Q9UKY7 258 aaKnown RBP11.66□□□□□ -0.54
GARNL3-220ENST00000496711 HHLA2Q9UM44 414 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 BOLA1Q9Y3E2 137 aa11.66□□□□□ -0.54
GARNL3-220ENST00000496711 LOC107986453A0A1B0GWG9 222 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 ANKRD20A5PA0PJZ0 165 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 XRCC3O43542 346 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 CELA2AP08217 269 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 SYPP08247 313 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 ITGA5P08648 1049 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 CCL4P13236 92 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 ADH6P28332 368 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 EIF1P41567 113 aaKnown RBP11.65□□□□□ -0.54
GARNL3-220ENST00000496711 PLA2G7Q13093 441 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 GSG1Q2KHT4 349 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 ELFN2Q5R3F8 820 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 PRAMEF20Q5VT98 475 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 CD276Q5ZPR3 534 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 HDDC2Q7Z4H3 204 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 C1orf210Q8IVY1 113 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 OR51D1Q8NGF3 324 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 OR5M1Q8NGP8 315 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 RNF133Q8WVZ7 376 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 GIMAP1Q8WWP7 306 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 PHF21AQ96BD5 680 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 ZBTB8AQ96BR9 441 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 RBP7Q96R05 134 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 OR5B2Q96R09 309 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 SLA2Q9H6Q3 261 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 TAS2R4Q9NYW5 299 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 KLK11Q9UBX7 282 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 OR52A1Q9UKL2 312 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 SPEGQ15772 3267 aa11.65□□□□□ -0.54
GARNL3-220ENST00000496711 LOC100289279A0A1B0GTE1 492 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 A0A1W2PNR3 127 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 GMDSO60547 372 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 CTAG2O75638 210 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 ISG15P05161 165 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 H2BFMP0C1H6 154 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 UBCP0CG48 685 aaKnown RBP11.64□□□□□ -0.55
GARNL3-220ENST00000496711 PTHLHP12272 177 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 IGFBP3P17936 291 aaPredicted RBP11.64□□□□□ -0.55
GARNL3-220ENST00000496711 POU3F4P49335 361 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 P2RY4P51582 365 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 CLRN1P58418 232 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 GPR85P60893 370 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 TNK1Q13470 666 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 GLT8D1Q68CQ7 371 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 ANKRD16Q6P6B7 361 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 TMEM81Q6P7N7 255 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 SLC23A3Q6PIS1 610 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 OPN5Q6U736 354 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 NHLRC1Q6VVB1 395 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 ZNF704Q6ZNC4 412 aaPredicted RBP11.64□□□□□ -0.55
GARNL3-220ENST00000496711 DNM1P46Q6ZS02 220 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 OR13C3Q8NGS6 347 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 C11orf40Q8WZ69 217 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 FAM3DQ96BQ1 224 aa11.64□□□□□ -0.55
GARNL3-220ENST00000496711 SLC25A44Q96H78 314 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms