RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 AQP7P3A6NL99 342 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 H7C417 338 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 FAAHO00519 579 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 MPZL2O60487 215 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 CCNB2O95067 398 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 KRT75O95678 551 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 LGI1O95970 557 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 WNT11O96014 354 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 SLC25A16P16260 332 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 GABRB1P18505 474 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 SELENOPP49908 381 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 CRISP3P54108 245 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 CDH12P55289 794 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 CDC42P60953 191 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 DSTNP60981 165 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 HOXC5Q00444 222 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 IFITM2Q01629 132 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 GGTLC2Q14390 218 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 RGNQ15493 299 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 TSTQ16762 297 aaKnown RBP9.51□□□□□ -0.89
RNF220-217ENST00000496262 TMEM225Q6GV28 225 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 THOC7Q6I9Y2 204 aaKnown RBP9.51□□□□□ -0.89
RNF220-217ENST00000496262 WBP2NLQ6ICG8 309 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 VHLLQ6RSH7 139 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 GDPD3Q7L5L3 318 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 CCDC190Q86UF4 302 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 ZNF440Q8IYI8 595 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 C10orf105Q8TEF2 133 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 NANOS1Q8WY41 292 aaKnown RBP9.51□□□□□ -0.89
RNF220-217ENST00000496262 TMEM45BQ96B21 275 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 SLC25A36Q96CQ1 311 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 KCNK17Q96T54 332 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 KCNS3Q9BQ31 491 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 ADAM19Q9H013 955 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 TPK1Q9H3S4 243 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 CACYBPQ9HB71 228 aaKnown RBP9.51□□□□□ -0.89
RNF220-217ENST00000496262 CLN6Q9NWW5 311 aa9.51□□□□□ -0.89
RNF220-217ENST00000496262 ZNF443Q9Y2A4 671 aaPredicted RBP9.51□□□□□ -0.89
RNF220-217ENST00000496262 A0A096LPE4 126 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 A0A1W2PPZ6 126 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 ELOA3DA6NLF2 546 aaPredicted RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 A8MVM7 634 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 ZNF587BE7ETH6 402 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 CCRL2O00421 344 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 FRS3O43559 492 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 NUDT7P0C024 238 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 AQP1P29972 269 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 C21orf33P30042 268 aaPredicted RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 APOBEC3AP31941 199 aaPredicted RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 ACAA2P42765 397 aaKnown RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 SLC15A1P46059 708 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 MAP2K6P52564 334 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 EFNA4P52798 201 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 NKX2-5P52952 324 aaPredicted RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 LOXL1Q08397 574 aaPredicted RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 RBBP4Q09028 425 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 ST3GAL4Q11206 333 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 LARS2Q15031 903 aaKnown RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 MICAQ29983 383 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 ELOA3BQ3SY89 546 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 TBRG1Q3YBR2 411 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 ATAD3CQ5T2N8 411 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 C1orf140Q5VVS0 124 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 PRAMEF8Q5VWM4 474 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 PRAMEF7Q5VXH5 474 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 NIPAL3Q6P499 406 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 PHC2Q8IXK0 858 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 KDM8Q8N371 416 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 CLIP4Q8N3C7 705 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 CELF2-AS1Q8N7Q2 184 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 POMGNT2Q8NAT1 580 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 IL17RDQ8NFM7 739 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 ELOA3Q8NG57 546 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 SLC38A5Q8WUX1 472 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 C17orf50Q8WW18 174 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 GEMIN6Q8WXD5 167 aaKnown RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 TMEM19Q96HH6 336 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 VRK1Q99986 396 aaPredicted RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 SLC30A2Q9BRI3 323 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 CENPOQ9BU64 300 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 SF3B5Q9BWJ5 86 aaKnown RBP9.5□□□□□ -0.89
RNF220-217ENST00000496262 CDCA4Q9BXL8 241 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 BEX2Q9BXY8 128 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 CHODLQ9H9P2 273 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 CALML5Q9NZT1 146 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 NDUFAF4Q9P032 175 aa9.5□□□□□ -0.89
RNF220-217ENST00000496262 ABCA1O95477 2261 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 IGHV1-18A0A0C4DH31 117 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 ARRDC5A6NEK1 342 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 PHF1O43189 567 aaPredicted RBP9.49□□□□□ -0.89
RNF220-217ENST00000496262 UPK3AO75631 287 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 AHSA1O95433 338 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 IFNA14P01570 189 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 HSMCR30P0CW71 290 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 PIPP12273 146 aaPredicted RBP9.49□□□□□ -0.89
RNF220-217ENST00000496262 USF1P22415 310 aaPredicted RBP9.49□□□□□ -0.89
RNF220-217ENST00000496262 RPS5P46782 204 aaKnown RBP9.49□□□□□ -0.89
RNF220-217ENST00000496262 MVDP53602 400 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 CRYBA2P53672 197 aa9.49□□□□□ -0.89
RNF220-217ENST00000496262 UBE2NP61088 152 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms