RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TVP23BQ9NYZ1 205 aa16.84■□□□□ 0.29
HDAC4-212ENST00000495497 TIMM10BQ9Y5J6 103 aa16.84■□□□□ 0.29
HDAC4-212ENST00000495497 CADP27708 2225 aa16.84■□□□□ 0.29
HDAC4-212ENST00000495497 C12orf71A8MTZ7 269 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 ATE1O95260 518 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 HLA-DQA2P01906 255 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 HMGN1P05114 100 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 LRBAP50851 2863 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 TEKQ02763 1124 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 PLP2Q04941 152 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 DAG1Q14118 895 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 KCNMB1Q16558 191 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 ZNF774Q6NX45 483 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 PAQR4Q8N4S7 273 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-212ENST00000495497 CBR4Q8N4T8 237 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 ZNF611Q8N823 705 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 SLC30A7Q8NEW0 376 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 SLC26A10Q8NG04 563 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 OR2T4Q8NH00 348 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 PTP4A1Q93096 173 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 SLC29A1Q99808 456 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 RIBC2Q9H4K1 309 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 MRPL22Q9NWU5 206 aaKnown RBP16.83■□□□□ 0.28
HDAC4-212ENST00000495497 ASH2LQ9UBL3 628 aa16.83■□□□□ 0.28
HDAC4-212ENST00000495497 IQCMA0A1B0GVH7 501 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 M0R129 80 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 RAF1P04049 648 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 ALPLP05186 524 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 ZNF35P13682 527 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 CD53P19397 219 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 SLC25A1P53007 311 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 PCBD1P61457 104 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 LSM6P62312 80 aaKnown RBP16.82■□□□□ 0.28
HDAC4-212ENST00000495497 GLO1Q04760 184 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 KEAP1Q14145 624 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 SNAPC1Q16533 368 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 KRT80Q6KB66 452 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 PLBD1Q6P4A8 553 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 CORO6Q6QEF8 472 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 VHLLQ6RSH7 139 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 LINC00346Q8IVM7 164 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 OR10H5Q8NGA6 315 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 SMAP2Q8WU79 429 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-212ENST00000495497 HINT3Q9NQE9 182 aaKnown RBP16.82■□□□□ 0.28
HDAC4-212ENST00000495497 USE1Q9NZ43 259 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 FBXL3Q9UKT7 428 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 LAMP3Q9UQV4 416 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 POLR1DQ9Y2S0 133 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 PDZD2O15018 2839 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 POLQO75417 2590 aa16.82■□□□□ 0.28
HDAC4-212ENST00000495497 ZAR1LA6NP61 321 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 SOD3P08294 240 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 DANCRP0C864 163 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 CCNOP22674 350 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 DNASE1P24855 282 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 RPS27P42677 84 aaKnown RBP16.81■□□□□ 0.28
HDAC4-212ENST00000495497 ALDH3A2P51648 485 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 ELF3P78545 371 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-212ENST00000495497 AQP6Q13520 282 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 RCN1Q15293 331 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 ZIK1Q3SY52 487 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-212ENST00000495497 SLX4IPQ5VYV7 408 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 C20orf204Q6ZNR8 217 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 SYT9Q86SS6 491 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 CPOQ8IVL8 374 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 ZNF511Q8NB15 262 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 BBS1Q8NFJ9 593 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 IL17RDQ8NFM7 739 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 PLEKHA8Q96JA3 519 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 CCL19Q99731 98 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 DHRS9Q9BPW9 319 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 C9orf16Q9BUW7 83 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 OR51V1Q9H2C8 321 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 LHFPL6Q9Y693 200 aa16.81■□□□□ 0.28
HDAC4-212ENST00000495497 NOTCH2Q04721 2471 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 ROS1P08922 2347 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 LOC100509620A0A075B734 347 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 PRR23D1E9PI22 279 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-212ENST00000495497 RER1O15258 196 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 PRKYO43930 277 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 PRR23D2P0DMB1 279 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-212ENST00000495497 PSKH1P11801 424 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 ANPEPP15144 967 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 STOMP27105 288 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 APLNRP35414 380 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 FABP6P51161 128 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 CCDC92Q53HC0 331 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-212ENST00000495497 LINC01590Q5TEZ4 76 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 OR4F15Q8NGB8 312 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 OR6K6Q8NGW6 343 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 TEX12Q9BXU0 123 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 GABARAPL3Q9BY60 117 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 OR51B6Q9H340 312 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 WDR76Q9H967 626 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 CDH20Q9HBT6 801 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 ITGB1BP2Q9UKP3 347 aa16.8■□□□□ 0.28
HDAC4-212ENST00000495497 AKAP6Q13023 2319 aa16.79■□□□□ 0.28
HDAC4-212ENST00000495497 RAI1Q7Z5J4 1906 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-212ENST00000495497 C5orf49A4QMS7 147 aa16.79■□□□□ 0.28
HDAC4-212ENST00000495497 SGCEO43556 437 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 478.6 ms