RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	RELL2	Q8NC24	303 aa	Predicted RBP	11.9	□□□□□ -0.5
APTX-231	ENST00000494973	GJC3	Q8NFK1	279 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	LILRB4	Q8NHJ6	448 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	OTOS	Q8NHW6	89 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	NABP1	Q96AH0	204 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	LGALS12	Q96DT0	336 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF696	Q9H7X3	374 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	VCX3A	Q9NNX9	186 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	AASS	Q9UDR5	926 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	ATPIF1	Q9UII2	106 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	LAMP5	Q9UJQ1	280 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	AMDHD2	Q9Y303	409 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	SNX5	Q9Y5X3	404 aa		11.9	□□□□□ -0.5
APTX-231	ENST00000494973	KALRN	O60229	2985 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	TVP23A	A6NH52	213 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF593	O00488	134 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-231	ENST00000494973	WNT11	O96014	354 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	IGHA1	P01876	353 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	TF	P02787	698 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	CDK1	P06493	297 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	EDNRA	P25101	427 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	CDA	P32320	146 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	ARR3	P36575	388 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	NAA10	P41227	235 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-231	ENST00000494973	UQCRFS1	P47985	274 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	ADORA2A-AS1	P86434	159 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	MVK	Q03426	396 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	EGR3	Q06889	387 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	ST3GAL4	Q11206	333 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	MRPL28	Q13084	256 aa	Known RBP	11.89	□□□□□ -0.51
APTX-231	ENST00000494973	TBRG1	Q3YBR2	411 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	LAIR2	Q6ISS4	152 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.89	□□□□□ -0.51
APTX-231	ENST00000494973	PRSS48	Q7RTY5	328 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	LUZP2	Q86TE4	346 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	CDC20B	Q86Y33	519 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	OR10H4	Q8NGA5	316 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	OR52I1	Q8NGK6	324 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	GGH	Q92820	318 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	C1orf198	Q9H425	327 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	AMBN	Q9NP70	447 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	KCNJ16	Q9NPI9	418 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	MRPL22	Q9NWU5	206 aa	Known RBP	11.89	□□□□□ -0.51
APTX-231	ENST00000494973	CYB5R1	Q9UHQ9	305 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	ERGIC3	Q9Y282	383 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	PCDHGB5	Q9Y5G0	923 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	MYO7B	Q6PIF6	2116 aa		11.89	□□□□□ -0.51
APTX-231	ENST00000494973	NCOA6	Q14686	2063 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-231	ENST00000494973	FREM1	Q5H8C1	2179 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	DAPL1	A0PJW8	107 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	MAGEA13P	A6NCF6	341 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	PTGES3L	E9PB15	166 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	C16orf97	H3BN30	126 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	MYL12B	O14950	172 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	SELENOF	O60613	162 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	RAD51D	O75771	328 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	PTH	P01270	115 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	APOC1	P02654	83 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	LYN	P07948	512 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	MRPL3	P09001	348 aa	Known RBP	11.88	□□□□□ -0.51
APTX-231	ENST00000494973	SORD	Q00796	357 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	ECH1	Q13011	328 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	TIMM23B	Q5SRD1	257 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF773	Q6PK81	442 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	DEGS2	Q6QHC5	323 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-231	ENST00000494973	TMPRSS11A	Q6ZMR5	421 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	FAM220A	Q7Z4H9	259 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	KCTD20	Q7Z5Y7	419 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	CXorf67	Q86X51	503 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-231	ENST00000494973	ALDH16A1	Q8IZ83	802 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	OR52N5	Q8NH56	324 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	BCL2L2	Q92843	193 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-231	ENST00000494973	RNASE6	Q93091	150 aa	Known RBP	11.88	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF837	Q96EG3	531 aa	Predicted RBP	11.88	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF416	Q9BWM5	594 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	CDCA4	Q9BXL8	241 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	HDHD2	Q9H0R4	259 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	NIPAL2	Q9H841	368 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	ASH2L	Q9UBL3	628 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973	TIMM10B	Q9Y5J6	103 aa		11.88	□□□□□ -0.51
APTX-231	ENST00000494973		A0A087WXM4	84 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	TRIM64	A6NGJ6	449 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	OR5H1	A6NKK0	313 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF878	C9JN71	531 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973		J3QRE1	110 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF254	O75437	659 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	LYZL6	O75951	148 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	KRT8	P05787	483 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	TACSTD2	P09758	323 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	ALOX5AP	P20292	161 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	GRB2	P62993	217 aa	Known RBP	11.87	□□□□□ -0.51
APTX-231	ENST00000494973	PLP2	Q04941	152 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	EIF2B1	Q14232	305 aa	Known RBP	11.87	□□□□□ -0.51
APTX-231	ENST00000494973	ENDOG	Q14249	297 aa	Known RBP	11.87	□□□□□ -0.51
APTX-231	ENST00000494973	RAB35	Q15286	201 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	GABRA6	Q16445	453 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	C9orf135	Q5VTT2	229 aa		11.87	□□□□□ -0.51
APTX-231	ENST00000494973	ZNF544	Q6NX49	715 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms