RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ITPR1Q14643 2758 aa9.73□□□□□ -0.85
PKP4-215ENST00000494945 ACACBO00763 2458 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ZNF587BE7ETH6 402 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ERVH48-1M5A8F1 160 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ZNHIT1O43257 154 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 LALBAP00709 142 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 CRHP06850 196 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 EDN3P14138 238 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 CDAP32320 146 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 RPS27P42677 84 aaKnown RBP9.72□□□□□ -0.85
PKP4-215ENST00000494945 OR3A2P47893 321 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 TGM4P49221 684 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 GBX2P52951 348 aaPredicted RBP9.72□□□□□ -0.85
PKP4-215ENST00000494945 ROR2Q01974 943 aaKnown RBP9.72□□□□□ -0.85
PKP4-215ENST00000494945 SSX1Q16384 188 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 SGCAQ16586 387 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 CEACAM16Q2WEN9 425 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 TIMM50Q3ZCQ8 353 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 CCDC58Q4VC31 144 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 FAM27BQ5VT28 67 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 DEGS2Q6QHC5 323 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 C19orf48Q6RUI8 117 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 RPTNQ6XPR3 784 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 SLC16A12Q6ZSM3 486 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 RHOUQ7L0Q8 258 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 FAM214BQ7L5A3 538 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 LINGO2Q7L985 606 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 NUFIP2Q7Z417 695 aaKnown RBP9.72□□□□□ -0.85
PKP4-215ENST00000494945 CD163Q86VB7 1156 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ATCAYQ86WG3 371 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 PHC2Q8IXK0 858 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ZNF679Q8IYX0 411 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 C9orf106Q8NAJ2 232 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 OR2AJ1Q8NGZ0 328 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ST7LQ8TDW4 575 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ISOC1Q96CN7 298 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 PELI1Q96FA3 418 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ALKBH3Q96Q83 286 aaPredicted RBP9.72□□□□□ -0.85
PKP4-215ENST00000494945 DOK1Q99704 481 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 WACQ9BTA9 647 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ABHD6Q9BV23 337 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 MROQ9BYG7 248 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 TTTY10Q9BZA0 68 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 C1orf198Q9H425 327 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 SIAEQ9HAT2 523 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 EMC7Q9NPA0 242 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 SLC7A10Q9NS82 523 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 ASF1BQ9NVP2 202 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 TMEM38BQ9NVV0 291 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 UPB1Q9UBR1 384 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 MRM2Q9UI43 246 aaKnown RBP9.72□□□□□ -0.85
PKP4-215ENST00000494945 IKZF2Q9UKS7 526 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 POLR1DQ9Y2S0 133 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 LHFPL6Q9Y693 200 aa9.72□□□□□ -0.85
PKP4-215ENST00000494945 HEATR1Q9H583 2144 aaKnown RBP9.71□□□□□ -0.85
PKP4-215ENST00000494945 RP1L1Q8IWN7 2480 aaPredicted RBP9.71□□□□□ -0.85
PKP4-215ENST00000494945 PRR32B1ATL7 298 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 PRRG2O14669 202 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 OGG1O15527 345 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 ZNF254O75437 659 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 GABARAPO95166 117 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 CNOT4O95628 575 aaKnown RBP9.71□□□□□ -0.86
PKP4-215ENST00000494945 ABHD16AO95870 558 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 CD1AP06126 327 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 CST2P09228 141 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 OR8G3PP0DMU2 310 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 CD53P19397 219 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 PSMA1P25786 263 aaKnown RBP9.71□□□□□ -0.86
PKP4-215ENST00000494945 GABRA5P31644 462 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 TIMP3P35625 211 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.86
PKP4-215ENST00000494945 RBPJQ06330 500 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 AQP6Q13520 282 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 TRAM1Q15629 374 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 LIPKQ5VXJ0 399 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 FBXW9Q5XUX1 488 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 RPL22L1Q6P5R6 122 aaKnown RBP9.71□□□□□ -0.86
PKP4-215ENST00000494945 GFRALQ6UXV0 394 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 ZNF627Q7L945 461 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.71□□□□□ -0.86
PKP4-215ENST00000494945 DCXRQ7Z4W1 244 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 KRT77Q7Z794 578 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 LINC00346Q8IVM7 164 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 YIPF7Q8N8F6 280 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 OR6K3Q8NGY3 331 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 RNF133Q8WVZ7 376 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 WBP1Q96G27 269 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 AMELYQ99218 206 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 FOXB1Q99853 325 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 ZNF416Q9BWM5 594 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 TP63Q9H3D4 680 aaPredicted RBP9.71□□□□□ -0.86
PKP4-215ENST00000494945 ACOXLQ9NUZ1 547 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 MALT1Q9UDY8 824 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 GDF2Q9UK05 429 aaPredicted RBP9.71□□□□□ -0.86
PKP4-215ENST00000494945 ZNF835Q9Y2P0 537 aa9.71□□□□□ -0.86
PKP4-215ENST00000494945 BSNQ9UPA5 3926 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 RTTNQ86VV8 2226 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 H3BMQ9 156 aa9.7□□□□□ -0.86
PKP4-215ENST00000494945 MAGEB4O15481 346 aaPredicted RBP9.7□□□□□ -0.86
PKP4-215ENST00000494945 PLPP2O43688 288 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms