RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 IL1RAPQ9NPH3 570 aa28.46■■■□□ 2.15
CBX4-203ENST00000494546 GPR160Q9UJ42 338 aa28.46■■■□□ 2.15
CBX4-203ENST00000494546 RTTNQ86VV8 2226 aa28.45■■■□□ 2.15
CBX4-203ENST00000494546 C12orf71A8MTZ7 269 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 OR10H3O60404 316 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 CTLA4P16410 223 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 RRM2P31350 389 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 WNT5AP41221 380 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 ZNF774Q6NX45 483 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 SMARCD3Q6STE5 483 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 DPY19L2P2Q6ZN68 376 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 ZDHHC21Q8IVQ6 265 aa28.45■■■□□ 2.14
CBX4-203ENST00000494546 IGLV3-9A0A075B6K5 115 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 SLC16A7O60669 478 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 HPXP02790 462 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 ZNF23P17027 643 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 RPS6KA3P51812 740 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 ZNF101Q8IZC7 436 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 FANK1Q8TC84 345 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 SNX33Q8WV41 574 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 SLCO1C1Q9NYB5 712 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 TMCC3Q9ULS5 477 aa28.44■■■□□ 2.14
CBX4-203ENST00000494546 YLPM1P49750 1951 aaKnown RBP28.43■■■□□ 2.14
CBX4-203ENST00000494546 LRP5LA4QPB2 252 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 IMPA2O14732 288 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 ATP6V1B2P21281 511 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 ELFN2Q5R3F8 820 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 SPATA46Q5T0L3 261 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 SYT9Q86SS6 491 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 ADCK1Q86TW2 530 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 HIPK1Q86Z02 1210 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 ACTR3BQ9P1U1 418 aa28.43■■■□□ 2.14
CBX4-203ENST00000494546 CHD3Q12873 2000 aaKnown RBP28.43■■■□□ 2.14
CBX4-203ENST00000494546 KIAA1324LA8MWY0 1029 aaPredicted RBP28.42■■■□□ 2.14
CBX4-203ENST00000494546 KHDRBS3O75525 346 aaKnown RBP28.42■■■□□ 2.14
CBX4-203ENST00000494546 PPP1R3DO95685 299 aa28.42■■■□□ 2.14
CBX4-203ENST00000494546 GLO1Q04760 184 aa28.42■■■□□ 2.14
CBX4-203ENST00000494546 OTPQ5XKR4 325 aa28.42■■■□□ 2.14
CBX4-203ENST00000494546 UNQ6126/PRO20091Q6UXV3 157 aa28.42■■■□□ 2.14
CBX4-203ENST00000494546 PTCHD4Q6ZW05 846 aa28.42■■■□□ 2.14
CBX4-203ENST00000494546 HINT3Q9NQE9 182 aaKnown RBP28.42■■■□□ 2.14
CBX4-203ENST00000494546 VSX1Q9NZR4 365 aaPredicted RBP28.42■■■□□ 2.14
CBX4-203ENST00000494546 COA3Q9Y2R0 106 aaPredicted RBP28.42■■■□□ 2.14
CBX4-203ENST00000494546 JMJD1CQ15652 2540 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 ABCA2Q9BZC7 2435 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 IFNGR2P38484 337 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 RIN1Q13671 783 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 TMEM154Q6P9G4 183 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 RINLQ6ZS11 566 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 ABHD4Q8TB40 342 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 RDH5Q92781 318 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 ERMAPQ96PL5 475 aaPredicted RBP28.41■■■□□ 2.14
CBX4-203ENST00000494546 OR52D1Q9H346 318 aa28.41■■■□□ 2.14
CBX4-203ENST00000494546 NCR1O76036 304 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 TXNDC12O95881 172 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 CALB2P22676 271 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 COL8A2P25067 703 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 FPR3P25089 353 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 GCH1P30793 250 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 SLC6A6P31641 620 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 CDKN2AP42771 156 aaKnown RBP28.4■■■□□ 2.14
CBX4-203ENST00000494546 MAGEB1P43366 347 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 CHN2P52757 468 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 SCRN3Q0VDG4 424 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 RFX4Q33E94 735 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 ZNF718Q3SXZ3 478 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 CHRFAM7AQ494W8 412 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 GLB1L2Q8IW92 636 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 SLC25A40Q8TBP6 338 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 MSI2Q96DH6 328 aaKnown RBP28.4■■■□□ 2.14
CBX4-203ENST00000494546 SNX18Q96RF0 628 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 WACQ9BTA9 647 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 NUAK2Q9H093 628 aa28.4■■■□□ 2.14
CBX4-203ENST00000494546 LOC100289279A0A1B0GTE1 492 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 C17orf100A8MU93 164 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 MPZL1O95297 269 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 TRIP10Q15642 601 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 MOGQ16653 247 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 RFPL4BQ6ZWI9 263 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 ARHGAP24Q8N264 748 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 CHODLQ9H9P2 273 aa28.39■■■□□ 2.14
CBX4-203ENST00000494546 NDRG4Q9ULP0 352 aaKnown RBP28.39■■■□□ 2.14
CBX4-203ENST00000494546 ANK3Q12955 4377 aaKnown RBP28.39■■■□□ 2.14
CBX4-203ENST00000494546 DOK2O60496 412 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 LILRA1O75019 489 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 IGHV3-13P01766 116 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 TACSTD2P09758 323 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 CENPAP49450 140 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 MTX3Q5HYI7 312 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 FAM166AQ6J272 317 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 GNPDA2Q8TDQ7 276 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 GTF3AQ92664 365 aaKnown RBP28.38■■■□□ 2.13
CBX4-203ENST00000494546 MARS2Q96GW9 593 aaKnown RBP28.38■■■□□ 2.13
CBX4-203ENST00000494546 C4orf45Q96LM5 186 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 SAMD8Q96LT4 415 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 IFT27Q9BW83 186 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 OR2J1Q9GZK6 312 aa28.38■■■□□ 2.13
CBX4-203ENST00000494546 SGCEO43556 437 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 LMX1BO60663 402 aa28.37■■■□□ 2.13
CBX4-203ENST00000494546 NGFP01138 241 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms