RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 DEFB113Q30KQ7 82 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 TMEM236Q5W0B7 351 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF544Q6NX49 715 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 SLC30A7Q8NEW0 376 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 NUP37Q8NFH4 326 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 OR4F15Q8NGB8 312 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 OR2T4Q8NH00 348 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 AKR7LQ8NHP1 331 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 MBD6Q96DN6 1003 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 NMNAT2Q9BZQ4 307 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 WNT5BQ9H1J7 359 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 SLC25A19Q9HC21 320 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 CA10Q9NS85 328 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 KRT84Q9NSB2 600 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 TMEFF2Q9UIK5 374 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-208ENST00000494334 HRNRQ86YZ3 2850 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 RIIAD1A6NNX1 92 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 SURF4O15260 269 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 CD8AP01732 235 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 HMGN1P05114 100 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 CLUP10909 449 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF3P17036 446 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 NR4A1P22736 598 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 APEX1P27695 318 aaKnown RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 APOBEC3AP31941 199 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 PYCR1P32322 319 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 SLC25A1P53007 311 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 ESRRGP62508 458 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 NKX6-1P78426 367 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 TEKQ02763 1124 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 AQP6Q13520 282 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 PTGES3Q15185 160 aaKnown RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 KRT80Q6KB66 452 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF774Q6NX45 483 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 DTX2Q86UW9 622 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 ALDH16A1Q8IZ83 802 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 MUC15Q8N387 334 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 PAQR4Q8N4S7 273 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 PROKR2Q8NFJ6 384 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 SLC26A10Q8NG04 563 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 OR51L1Q8NGJ5 315 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 OR9Q1Q8NGQ5 310 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 PTP4A1Q93096 173 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 TRAF4Q9BUZ4 470 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 OSBPL10Q9BXB5 764 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 C1orf198Q9H425 327 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 FAIMQ9NVQ4 179 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 BEX4Q9NWD9 120 aaPredicted RBP11.71□□□□□ -0.53
COL1A1-208ENST00000494334 ASH2LQ9UBL3 628 aa11.71□□□□□ -0.53
COL1A1-208ENST00000494334 PDZD2O15018 2839 aa11.71□□□□□ -0.54
COL1A1-208ENST00000494334 LOC100509620A0A075B734 347 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 FAM183AA6NL82 134 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 HLA-DQA2P01906 255 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 GYPBP06028 91 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 SPI1P17947 270 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 IGFBP5P24593 272 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 STOMP27105 288 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 EPHA2P29317 976 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 APLNRP35414 380 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 SCRN3Q0VDG4 424 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 DAG1Q14118 895 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 TBC1D28Q2M2D7 210 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 AGAP6Q5VW22 663 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 VHLLQ6RSH7 139 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 FBXL14Q8N1E6 418 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 PQLC1Q8N2U9 271 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 OR1J2Q8NGS2 313 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 POM121L2Q96KW2 1035 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 CIB1Q99828 191 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 FOXC2Q99958 501 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 RBM4BQ9BQ04 359 aaKnown RBP11.7□□□□□ -0.54
COL1A1-208ENST00000494334 HCAR1Q9BXC0 346 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 GRIP2Q9C0E4 1043 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 HEATR1Q9H583 2144 aaKnown RBP11.7□□□□□ -0.54
COL1A1-208ENST00000494334 MED20Q9H944 212 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 CBLN4Q9NTU7 201 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 MRPL22Q9NWU5 206 aaKnown RBP11.7□□□□□ -0.54
COL1A1-208ENST00000494334 TVP23BQ9NYZ1 205 aa11.7□□□□□ -0.54
COL1A1-208ENST00000494334 NAV2Q8IVL1 2488 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 TVP23AA6NH52 213 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 OVOL3O00110 214 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 RER1O15258 196 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 GPRIN2O60269 458 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 TMCC2O75069 709 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 SNAP29O95721 258 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 OR4A8P0C604 315 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 CCNOP22674 350 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 THBS4P35443 961 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 GGT2P36268 569 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 POLR2IP36954 125 aaKnown RBP11.69□□□□□ -0.54
COL1A1-208ENST00000494334 ART1P52961 327 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 GALK2Q01415 458 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 SNTB2Q13425 540 aaKnown RBP11.69□□□□□ -0.54
COL1A1-208ENST00000494334 ADIPOQQ15848 244 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 MST1LQ2TV78 715 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 CCDC92Q53HC0 331 aaPredicted RBP11.69□□□□□ -0.54
COL1A1-208ENST00000494334 LINC01590Q5TEZ4 76 aa11.69□□□□□ -0.54
COL1A1-208ENST00000494334 C11orf71Q6IPW1 123 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms