RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 IGHV2OR16-5A0A0B4J2B6 119 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 ELOVL7A1L3X0 281 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 SH3PXD2BA1X283 911 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 FAM220BPB1ANY3 271 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 SLC22A2O15244 555 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 CCDC22O60826 627 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 ZFPL1O95159 310 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 BCL10O95999 233 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 ASAH2BP0C7U1 165 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 COX4I1P13073 169 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 B4GALT1P15291 398 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 THBS4P35443 961 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 PTDSS1P48651 473 aaKnown RBP6.97□□□□□ -1.29
RIF1-211ENST00000494333 SNRPD2P62316 118 aaKnown RBP6.97□□□□□ -1.29
RIF1-211ENST00000494333 SELENOWP63302 87 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 MELKQ14680 651 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 ADIPOQQ15848 244 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 GSG1Q2KHT4 349 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 CYBRD1Q53TN4 286 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 KHDC1LQ5JSQ8 128 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 KRT80Q6KB66 452 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 CSPG4Q6UVK1 2322 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 ZNF627Q7L945 461 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 SLC46A3Q7Z3Q1 461 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 PIWIL3Q7Z3Z3 882 aaKnown RBP6.97□□□□□ -1.29
RIF1-211ENST00000494333 NANOGNBQ7Z5D8 188 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 ALPK2Q86TB3 2170 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 SLC15A3Q8IY34 581 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 MICU2Q8IYU8 434 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 NUP37Q8NFH4 326 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 OR2T12Q8NG77 320 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 PFN4Q8NHR9 129 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 TMEM255BQ8WV15 326 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 TMEM239Q8WW34 195 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 TMEM54Q969K7 222 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 ZNF566Q969W8 418 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 RCN3Q96D15 328 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 SLC25A44Q96H78 314 aaPredicted RBP6.97□□□□□ -1.29
RIF1-211ENST00000494333 SORCS2Q96PQ0 1159 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 MED4Q9NPJ6 270 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 YAE1D1Q9NRH1 226 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 CMTM6Q9NX76 183 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 GLTPQ9NZD2 209 aa6.97□□□□□ -1.29
RIF1-211ENST00000494333 UNC119BA6NIH7 251 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 DHHO43323 396 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 TLX2O43763 284 aaPredicted RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 CD5LO43866 347 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 CRLF1O75462 422 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 PDE5AO76074 875 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 OR5F1O95221 314 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 SPDEFO95238 335 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 ABHD16AO95870 558 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 QDPRP09417 244 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 PATE4P0C8F1 98 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 SLC25A16P16260 332 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 NPR2P20594 1047 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 IFNA8P32881 189 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 AQP2P41181 271 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 RBM34P42696 430 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 YAP1P46937 504 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 UGT2B15P54855 530 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 MXRA7P84157 204 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 RPL18Q07020 188 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 LOXL1Q08397 574 aaPredicted RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 ST3GAL3Q11203 375 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 SNTB2Q13425 540 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 DAG1Q14118 895 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 EFNB3Q15768 340 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 SPATA21Q7Z572 469 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 PRIMA1Q86XR5 153 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 SKA3Q8IX90 412 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 SLC22A24Q8N4F4 322 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 C10orf105Q8TEF2 133 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 LZICQ8WZA0 190 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 SGTBQ96EQ0 304 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 ZNF75AQ96N20 296 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 TNFRSF13CQ96RJ3 184 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 DOK1Q99704 481 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 HOPXQ9BPY8 73 aaPredicted RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 POLR2J2Q9GZM3 115 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 RAB1BQ9H0U4 201 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 POLR2J3Q9H1A7 115 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 PLK3Q9H4B4 646 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 ZNF442Q9H7R0 627 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 EFCAB1Q9HAE3 211 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 NOX3Q9HBY0 568 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 C20orf141Q9NUB4 165 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 MRPS18AQ9NVS2 196 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 ZNF224Q9NZL3 707 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 AP3M1Q9Y2T2 418 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 MED31Q9Y3C7 131 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 FKBP7Q9Y680 259 aa6.96□□□□□ -1.3
RIF1-211ENST00000494333 FN1P02751 2386 aaKnown RBP6.96□□□□□ -1.3
RIF1-211ENST00000494333 NF1P21359 2839 aa6.95□□□□□ -1.3
RIF1-211ENST00000494333 NAV3Q8IVL0 2385 aa6.95□□□□□ -1.3
RIF1-211ENST00000494333 HIVEP2P31629 2446 aa6.95□□□□□ -1.3
RIF1-211ENST00000494333 A0A096LNT2 108 aa6.95□□□□□ -1.3
RIF1-211ENST00000494333 A0A1W2PRG6 482 aa6.95□□□□□ -1.3
RIF1-211ENST00000494333 TMEM129A0AVI4 362 aa6.95□□□□□ -1.3
RIF1-211ENST00000494333 A8MV72 311 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms