RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 LRGUKQ96M69 825 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 IFT27Q9BW83 186 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 NUAK2Q9H093 628 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 RAB1BQ9H0U4 201 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 MUC13Q9H3R2 512 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 C1orf198Q9H425 327 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 FN3KQ9H479 309 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 EGLN3Q9H6Z9 239 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 NF1P21359 2839 aa12.63□□□□□ -0.39
ATG4B-224ENST00000494132 LYNX1G3V0Z9 82 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 M0R233 179 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 DCTN6O00399 190 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 SNAP29O95721 258 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 PTHP01270 115 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 LYNX1P0DP58 116 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 NAT2P11245 290 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 SLC6A6P31641 620 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 WNT5AP41221 380 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 PDLIM4P50479 330 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 GGTLC2Q14390 218 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 MEP1BQ16820 701 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 SLC35F1Q5T1Q4 408 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 LEG1Q6P5S2 330 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 OR1J2Q8NGS2 313 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 OR1J1Q8NGS3 322 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 GNPDA2Q8TDQ7 276 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 POM121L2Q96KW2 1035 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 NMNAT3Q96T66 252 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 PLA2G12AQ9BZM1 189 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 C1orf21Q9H246 121 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 LRMDAQ9H2I8 198 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 MAGIXQ9H6Y5 334 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 VSX1Q9NZR4 365 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-224ENST00000494132 REV1Q9UBZ9 1251 aa12.62□□□□□ -0.39
ATG4B-224ENST00000494132 ACOT8O14734 319 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 GYG2O15488 501 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 SYNGR3O43761 229 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 KHDRBS3O75525 346 aaKnown RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 KRT36O76013 467 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 CCNB2O95067 398 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 GASTP01350 101 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 HIST1H1CP16403 213 aaKnown RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 IFNGR2P38484 337 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 UCP2P55851 309 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 DSCR9P59020 149 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 TSPAN31Q12999 210 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 FAM98BQ52LJ0 330 aaKnown RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 ZNF620Q6ZNG0 422 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 RFPL4BQ6ZWI9 263 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 ADCK1Q86TW2 530 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 JAZF1Q86VZ6 243 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 C11orf40Q8WZ69 217 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 GTF3AQ92664 365 aaKnown RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 SLC7A6OSQ96CW6 309 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 TAAR3PQ9P1P4 343 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 SAMHD1Q9Y3Z3 626 aaKnown RBP12.61□□□□□ -0.39
ATG4B-224ENST00000494132 TIMM10BQ9Y5J6 103 aa12.61□□□□□ -0.39
ATG4B-224ENST00000494132 C12orf71A8MTZ7 269 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 DOK2O60496 412 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 SOX14O95416 240 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 STAMBPO95630 424 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 TXNDC12O95881 172 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 NGFP01138 241 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 HPXP02790 462 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 CSF3P09919 207 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 DAOP14920 347 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 SLC25A16P16260 332 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 NOS3P29474 1203 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 MPV17P39210 176 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 RAD52P43351 418 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 NKPD1Q17RQ9 610 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 OR2T5Q6IEZ7 315 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 ZNF770Q6IQ21 691 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-224ENST00000494132 ALDH16A1Q8IZ83 802 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 ADGRG5Q8IZF4 528 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 AQP11Q8NBQ7 271 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 OR8D4Q8NGM9 314 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 OR2T29Q8NH02 315 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 ABHD4Q8TB40 342 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 SYNPRQ8TBG9 265 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 CANT1Q8WVQ1 401 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 SLC7A6Q92536 515 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 PIMREGQ9BSJ6 248 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 BPESC1Q9GZL8 116 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 REEP1Q9H902 201 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 RPRD1BQ9NQG5 326 aaKnown RBP12.6□□□□□ -0.39
ATG4B-224ENST00000494132 ASH2LQ9UBL3 628 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 POLR1DQ9Y2S0 133 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 CDH10Q9Y6N8 788 aa12.6□□□□□ -0.39
ATG4B-224ENST00000494132 ANK3Q12955 4377 aaKnown RBP12.6□□□□□ -0.39
ATG4B-224ENST00000494132 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.59□□□□□ -0.398e-9■■□□□ 12.1
ATG4B-224ENST00000494132 VWC2LB2RUY7 222 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 SGCEO43556 437 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 AHCYL1O43865 530 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 NCR1O76036 304 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 RENP00797 406 aa12.59□□□□□ -0.39
ATG4B-224ENST00000494132 TP53P04637 393 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms