RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 TMEM68Q96MH6 324 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 NMES1Q9C002 83 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACTR3CQ9C0K3 210 aaPredicted RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC5A7Q9GZV3 580 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 CRLF2Q9HC73 371 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 BPIFA1Q9NP55 256 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 RPRD1BQ9NQG5 326 aaKnown RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 RNF146Q9NTX7 359 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATPIF1Q9UII2 106 aa2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 UBQLN1Q9UMX0 589 aaKnown RBP2.24□□□□□ -2.05
CDC42EP3-205ENST00000494083 ANKRD12Q6UB98 2062 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATG2BQ96BY7 2078 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 CFAP54Q96N23 3096 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 IGKV1-8A0A0C4DH67 115 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 IGLV5-39A0A0G2JS06 123 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAM90A10PA6NDY2 464 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR51F1A6NGY5 319 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC25A17O43808 307 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GMDSO60547 372 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 CA11O75493 328 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRKRAO75569 313 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 AP2A2O94973 939 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 IFNA16P05015 189 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GNSP15586 552 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ADRA2CP18825 462 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 CCL1P22362 96 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GCH1P30793 250 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GDI1P31150 447 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TSFMP43897 325 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 XKP51811 444 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 DEFA1P59665 94 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 DEFA3P59666 94 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SEC61A1P61619 476 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ILF3Q12906 894 aaKnown RBP eCLIP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ENPP2Q13822 863 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRTGQ2VWP7 1150 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM249Q2WGJ8 235 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAM174BQ3ZCQ3 159 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 CDNFQ49AH0 187 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 AARDQ4LEZ3 155 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SFXN4Q6P4A7 337 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 C5orf46Q6UWT4 87 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 FBXW12Q6X9E4 464 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 CERS6Q6ZMG9 384 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 MEX3BQ6ZN04 569 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMUB2Q71RG4 321 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ADGRD2Q7Z7M1 963 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GPSM1Q86YR5 675 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ARL14Q8N4G2 192 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 RBMXL3Q8N7X1 1067 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SYT14Q8NB59 555 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR1M1Q8NGA1 313 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR10G2Q8NGC3 310 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR13C8Q8NGS7 320 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR5J2Q8NH18 312 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 C2orf15Q8WU43 125 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SUSD6Q92537 303 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 HAVCR1Q96D42 359 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SMARCD1Q96GM5 515 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SIGLEC12Q96PQ1 595 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 AGMATQ9BSE5 352 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 PIMREGQ9BSJ6 248 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TM6SF2Q9BZW4 377 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM39BQ9GZU3 492 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SMDT1Q9H4I9 107 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OPA3Q9H6K4 179 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM185BQ9H7F4 350 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 WFDC1Q9HC57 220 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 Q9N2J8 555 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ABCB10Q9NRK6 738 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF282Q9UDV7 671 aaPredicted RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 MOKQ9UQ07 419 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 RPL36Q9Y3U8 105 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 POLR3HQ9Y535 204 aaPredicted RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A1W2PPE3 182 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A1W2PQ72 361 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 NPIPB13A6NJU9 1138 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GLOD5A6NK44 160 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ANXA2P2A6NMY6 339 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC38A8A6NNN8 435 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 NPIPB4C9JG80 1138 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 K7EP13 123 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 LRRTM2O43300 516 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 RGS14O43566 566 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GATBO75879 557 aaKnown RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 GLSO94925 669 aaPredicted RBP2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 KRT75O95678 551 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 IFNA7P01567 189 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 IGHG1P01857 330 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 KLKB1P03952 638 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ISG15P05161 165 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 RFPL3SP0C7P2 107 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 TBC1D3HP0C7X1 549 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACP5P13686 325 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATF1P18846 271 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SDC2P34741 201 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR1G1P47890 313 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 PITPNBP48739 271 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 VEGFCP49767 419 aa2.23□□□□□ -2.05
CDC42EP3-205ENST00000494083 SGSHP51688 502 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms