RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DEFB110Q30KQ9 67 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 ACTBL2Q562R1 376 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 PEAR1Q5VY43 1037 aaPredicted RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 SLC36A1Q7Z2H8 476 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 PLXDC1Q8IUK5 500 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 PDZD9Q8IXQ8 264 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 IZUMO1Q8IYV9 350 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 ZDHHC22Q8N966 263 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 CLEC1AQ8NC01 280 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 OR52N5Q8NH56 324 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 PTPMT1Q8WUK0 201 aaPredicted RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 PATE1Q8WXA2 126 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 RNF166Q96A37 237 aaPredicted RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 ADIPOR1Q96A54 375 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SLC41A2Q96JW4 573 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SFXN2Q96NB2 322 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 MOGAT1Q96PD6 335 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 MAP3K3Q99759 626 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 TTTY10Q9BZA0 68 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SYT4Q9H2B2 425 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 EXO5Q9H790 373 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 ELOVL3Q9HB03 270 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SRA1Q9HD15 236 aaKnown RBP10.36□□□□□ -0.75
RFC4-214ENST00000494047 FANCFQ9NPI8 374 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 LANCL2Q9NS86 450 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 COMMD9Q9P000 198 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 PIPOXQ9P0Z9 390 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SUSD2Q9UGT4 822 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 CYP8B1Q9UNU6 501 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SRPK3Q9UPE1 567 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 SPEF1Q9Y4P9 236 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 R4GMQ9 66 aa10.36□□□□□ -0.75
RFC4-214ENST00000494047 CACNA1EQ15878 2313 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 NUDT19A8MXV4 375 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ZNF208O43345 1280 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 TSPAN2O60636 221 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 NPIPB7O75200 414 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 AKR7A3O95154 331 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 MPC2O95563 127 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 WNT11O96014 354 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 CD8AP01732 235 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 MAS1P04201 325 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 CD74P04233 296 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 RLN1P04808 185 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 MGMTP16455 207 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ADRA2CP18825 462 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 CD27P26842 260 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 MSX1P28360 303 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 APOBEC1P41238 236 aaKnown RBP10.35□□□□□ -0.75
RFC4-214ENST00000494047 RAD52P43351 418 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 SOX2P48431 317 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 DNASE1L1P49184 302 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ZNF117Q03924 483 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ARL6IP1Q15041 203 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 MEP1BQ16820 701 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 PCK2Q16822 640 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 RSPO4Q2I0M5 234 aaPredicted RBP10.35□□□□□ -0.75
RFC4-214ENST00000494047 WDR38Q5JTN6 314 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 C1orf100Q5SVJ3 147 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 C1orf140Q5VVS0 124 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 TMEM225Q6GV28 225 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 LYPD8Q6UX82 237 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 GSG1LQ6UXU4 331 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 Q6ZTK2 550 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 SYT9Q86SS6 491 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 CATSPERDQ86XM0 798 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ADPRHL1Q8NDY3 354 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 CCDC54Q8NEL0 328 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 BEST4Q8NFU0 473 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ZPLD1Q8TCW7 415 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ORAI3Q9BRQ5 295 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 NXF5Q9H1B4 397 aaKnown RBP10.35□□□□□ -0.75
RFC4-214ENST00000494047 STARD5Q9NSY2 213 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 ZNF224Q9NZL3 707 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 FBLN5Q9UBX5 448 aa10.35□□□□□ -0.75
RFC4-214ENST00000494047 TNRC6BQ9UPQ9 1833 aaKnown RBP10.35□□□□□ -0.75
RFC4-214ENST00000494047 HEATR5AQ86XA9 2040 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 CNOT1A5YKK6 2376 aaKnown RBP10.34□□□□□ -0.75
RFC4-214ENST00000494047 IGLV1-36A0A0B4J1U3 117 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 CIB4A0PJX0 185 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 TMEM82A0PJX8 343 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 G3V3Q6 166 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
RFC4-214ENST00000494047 DUX1O43812 170 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 SUSD5O60279 629 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 CDC123O75794 336 aaPredicted RBP10.34□□□□□ -0.75
RFC4-214ENST00000494047 RAB3DO95716 219 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 BPNT1O95861 308 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 F13BP05160 661 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 ADRB1P08588 477 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 HLA-GP17693 338 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 IGFBP3P17936 291 aaPredicted RBP10.34□□□□□ -0.75
RFC4-214ENST00000494047 FBLP22087 321 aaKnown RBP10.34□□□□□ -0.75
RFC4-214ENST00000494047 NUP62P37198 522 aaPredicted RBP10.34□□□□□ -0.75
RFC4-214ENST00000494047 ADAM8P78325 824 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 HSD11B2P80365 405 aa10.34□□□□□ -0.75
RFC4-214ENST00000494047 CYCSP99999 105 aaKnown RBP10.34□□□□□ -0.75
RFC4-214ENST00000494047 ACKR1Q16570 336 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms