RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 MAN2C1Q9NTJ4 1040 aa9.85□□□□□ -0.83
COL6A3-213ENST00000493475 ARGLU1Q9NWB6 273 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-213ENST00000493475 A0A1W2PPL8 197 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 IFNL4K9M1U5 179 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 WNT9BO14905 357 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 RGS9O75916 674 aaPredicted RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 SLC2A10O95528 541 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 ABHD16AO95870 558 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 IGHV1-46P01743 117 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 ADH4P08319 380 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 MSR1P21757 451 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 CPT2P23786 658 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 ARFIP2P53365 341 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 RPL27P61353 136 aaKnown RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 ERVS71-1P61550 626 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 ERVK-25P63136 954 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 TNFAIP6P98066 277 aaPredicted RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 FOXL1Q12952 345 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 LRRC23Q53EV4 343 aaPredicted RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 MTX3Q5HYI7 312 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 SPATA46Q5T0L3 261 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 ARMC4Q5T2S8 1044 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 NANOGP8Q6NSW7 305 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 PFN4Q8NHR9 129 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 SLC25A40Q8TBP6 338 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 KLF14Q8TD94 323 aaPredicted RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 IPCEF1Q8WWN9 437 aaPredicted RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 POP5Q969H6 163 aaKnown RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 BPIFA2Q96DR5 249 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 POM121L2Q96KW2 1035 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 C4orf45Q96LM5 186 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 PRSS27Q9BQR3 290 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 OR2H1Q9GZK4 316 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 OR2J1Q9GZK6 312 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 KRCC1Q9NPI7 259 aaPredicted RBP9.84□□□□□ -0.83
COL6A3-213ENST00000493475 HIF3AQ9Y2N7 669 aa9.84□□□□□ -0.83
COL6A3-213ENST00000493475 AHCYL1O43865 530 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 PRSS23O95084 383 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 LYPD3O95274 346 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 THY1P04216 161 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 CD55P08174 381 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 IFI30P13284 250 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 ADRA2CP18825 462 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 MAKP20794 623 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-213ENST00000493475 LAP3P28838 519 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 CDAP32320 146 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 RPL4P36578 427 aaKnown RBP9.83□□□□□ -0.84
COL6A3-213ENST00000493475 SLC9A3P48764 834 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 MMP15P51511 669 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 PSG4Q00888 419 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 PIN1Q13526 163 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-213ENST00000493475 SELPLGQ14242 412 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 SLC27A4Q6P1M0 643 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 ARPINQ7Z6K5 226 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 OAFQ86UD1 273 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 CYP4Z1Q86W10 505 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 WDFY1Q8IWB7 410 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 MUC20Q8N307 709 aaPredicted RBP9.83□□□□□ -0.84
COL6A3-213ENST00000493475 OR4D11Q8NGI4 311 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 LRRC58Q96CX6 371 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 THOC1Q96FV9 657 aaKnown RBP9.83□□□□□ -0.84
COL6A3-213ENST00000493475 MARS2Q96GW9 593 aaKnown RBP9.83□□□□□ -0.84
COL6A3-213ENST00000493475 TPD52L3Q96J77 140 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 PRRC1Q96M27 445 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 SLC6A7Q99884 636 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 FNDC11Q9BVV2 318 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 GRHPRQ9UBQ7 328 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 OR5V1Q9UGF6 321 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 NPTNQ9Y639 398 aa9.83□□□□□ -0.84
COL6A3-213ENST00000493475 EFCAB9A8MZ26 197 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 J3QW42 95 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 MRASO14807 208 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 ICMTO60725 284 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
COL6A3-213ENST00000493475 IGHMP01871 453 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 IFNW1P05000 195 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 COX5BP10606 129 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 CTXN1P60606 82 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 LCN2P80188 198 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 TMEM155Q4W5P6 130 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 CYBRD1Q53TN4 286 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 ESCO2Q56NI9 601 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 SHISA2Q6UWI4 295 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 BTNL3Q6UXE8 466 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 HDXQ7Z353 690 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 NKAIN4Q8IVV8 208 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 ZNF101Q8IZC7 436 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 RNF113BQ8IZP6 322 aaKnown RBP9.82□□□□□ -0.84
COL6A3-213ENST00000493475 OR2T12Q8NG77 320 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 OR5L1Q8NGL2 311 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 MOSPD2Q8NHP6 518 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 HDAC2Q92769 488 aaKnown RBP9.82□□□□□ -0.84
COL6A3-213ENST00000493475 NABP1Q96AH0 204 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 SAMD8Q96LT4 415 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 TMEM106BQ9NUM4 274 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 TBCCD1Q9NVR7 557 aa9.82□□□□□ -0.84
COL6A3-213ENST00000493475 AUP1Q9Y679 476 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms