RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 OR51V1Q9H2C8 321 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 FN3KQ9H479 309 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 ELOVL3Q9HB03 270 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 NTN4Q9HB63 628 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 EMC7Q9NPA0 242 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 PLEK2Q9NYT0 353 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 TVP23BQ9NYZ1 205 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 CRNNQ9UBG3 495 aaPredicted RBP7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 ST6GALNAC2Q9UJ37 374 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 KCNG2Q9UJ96 466 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 FBXO9Q9UK97 447 aaPredicted RBP7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 ITGB1BP2Q9UKP3 347 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 PMF1-BGLAPU3KQ54 211 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 PLCE1Q9P212 2302 aa7.08□□□□□ -1.28
TM4SF1-204ENST00000493348 IGKV1D-43A0A0B4J1Z2 117 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 IGHV2OR16-5A0A0B4J2B6 119 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 C5orf49A4QMS7 147 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 OR6C68A6NDL8 312 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 FAM171A2A8MVW0 826 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ANKRD65E5RJM6 399 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 SIAH2O43255 324 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 SGCEO43556 437 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 SMPD2O60906 423 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 PLAUP00749 431 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 LCKP06239 509 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ERCC1P07992 297 aaPredicted RBP7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 IGFBP1P08833 259 aaPredicted RBP7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 PATE4P0C8F1 98 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 STOMP27105 288 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 APOBEC3AP31941 199 aaPredicted RBP7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 PYCR1P32322 319 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 RAD52P43351 418 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 HTR5AP47898 357 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ALDH3A2P51648 485 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ADAM8P78325 824 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 CRMP1Q14194 572 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 TAF13Q15543 124 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ETFDHQ16134 617 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 PABPC1L2AQ5JQF8 200 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 KDM4DQ6B0I6 523 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 KRT80Q6KB66 452 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ZNF544Q6NX49 715 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 CXXC5Q7LFL8 322 aaKnown RBP7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 OR6V1Q8N148 313 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 MUC15Q8N387 334 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ZNF611Q8N823 705 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 NPEPL1Q8NDH3 523 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 OR9Q1Q8NGQ5 310 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 OR4Q3Q8NH05 313 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 C11orf40Q8WZ69 217 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 HTRA1Q92743 480 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 NABP1Q96AH0 204 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 NMD3Q96D46 503 aaKnown RBP7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 TSSK2Q96PF2 358 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 PITX2Q99697 317 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 TMEM204Q9BSN7 226 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 OR2H1Q9GZK4 316 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 PLEKHF2Q9H8W4 249 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 SLC25A19Q9HC21 320 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 IMPAD1Q9NX62 359 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 B3GNT2Q9NY97 397 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 ASH2LQ9UBL3 628 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 REV1Q9UBZ9 1251 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 GPR160Q9UJ42 338 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 LAMP3Q9UQV4 416 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 PLEKHA6Q9Y2H5 1048 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 CMAHPQ9Y471 501 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 UGT2A1Q9Y4X1 527 aa7.07□□□□□ -1.28
TM4SF1-204ENST00000493348 HRNRQ86YZ3 2850 aaPredicted RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SNTNA6NMZ2 147 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SHISA9B4DS77 424 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 H3BNX3 289 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 EI24O14681 340 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SURF4O15260 269 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 MITFO75030 526 aaPredicted RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 ABHD16AO95870 558 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 IGLV1-44P01699 117 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 CELA3BP08861 270 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SPARCP09486 303 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 ZNF14P17017 642 aaPredicted RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SPI1P17947 270 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 APEX1P27695 318 aaKnown RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 GCH1P30793 250 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SLC25A1P53007 311 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 KRTAP10-9P60411 292 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SNRPD2P62316 118 aaKnown RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 CDK5Q00535 292 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SPOCK1Q08629 439 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 ECH1Q13011 328 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SNTB2Q13425 540 aaKnown RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 PTGES3Q15185 160 aaKnown RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 RAB35Q15286 201 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 RCN1Q15293 331 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 TRIP10Q15642 601 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 MOGQ16653 247 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 SLC35D3Q5M8T2 416 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 TMEM236Q5W0B7 351 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 RGS7BPQ6MZT1 257 aaPredicted RBP7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 ZNF774Q6NX45 483 aa7.06□□□□□ -1.28
TM4SF1-204ENST00000493348 TMEM154Q6P9G4 183 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms