RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 ADGRE4PQ86SQ3 457 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 GLB1L2Q8IW92 636 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 TEX19Q8NA77 164 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 OR52N1Q8NH53 320 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 HTRA1Q92743 480 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 ALG8Q9BVK2 526 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC25A18Q9H1K4 315 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 WDR76Q9H967 626 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 SMURF1Q9HCE7 757 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 PARPBPQ9NWS1 579 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 NDUFB11Q9NX14 153 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 NOSIPQ9Y314 301 aaKnown RBP12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 CAB39Q9Y376 341 aaPredicted RBP12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 MED12LQ86YW9 2145 aa12.47□□□□□ -0.41
PDZRN3-210ENST00000492909 AHRRA9YTQ3 701 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNHIT1O43257 154 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 MRPL33O75394 65 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 TGM6O95932 706 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 NTF4P34130 210 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 DEFA1P59665 94 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 DEFA3P59666 94 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 ADAM8P78325 824 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 ZNF85Q03923 595 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 TMPRSS11AQ6ZMR5 421 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 C20orf196Q8IYI0 205 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 SLC26A10Q8NG04 563 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 OR5M9Q8NGP3 310 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 OR6N2Q8NGY6 317 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 CEP19Q96LK0 163 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 MNTQ99583 582 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 KCNS3Q9BQ31 491 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 EXOSC4Q9NPD3 245 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 MRPL22Q9NWU5 206 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 CLCF1Q9UBD9 225 aa12.46□□□□□ -0.41
PDZRN3-210ENST00000492909 A0A1W2PPL8 197 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF670-ZNF695F2Z2N8 137 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 CTDSP2O14595 271 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 HRGP04196 525 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 YES1P07947 543 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 GAAP10253 952 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 SPNP16150 400 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 LAP3P28838 519 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 RPS19P39019 145 aaKnown RBP12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF133P52736 654 aaPredicted RBP12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 ACTA2P62736 377 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 ACTG2P63267 376 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 C10orf128Q5T292 105 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 DPY19L4Q7Z388 723 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 P4HA3Q7Z4N8 544 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 CDC20BQ86Y33 519 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 CISD2Q8N5K1 135 aaKnown RBP12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 CHAC2Q8WUX2 184 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 WBP1Q96G27 269 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 MRPL48Q96GC5 212 aaKnown RBP12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 TRIB1Q96RU8 372 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 SLC30A2Q9BRI3 323 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 ULBP2Q9BZM5 246 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 CALHM2Q9HA72 323 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 GP6Q9HCN6 339 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 LAMP5Q9UJQ1 280 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 CLEC4AQ9UMR7 237 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 TMEM14AQ9Y6G1 99 aa12.46□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF593O00488 134 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 MPZL1O95297 269 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF823P16415 610 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 TNFSF8P32971 234 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 CD79BP40259 229 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 RORCP51449 518 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 MEP1BQ16820 701 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 PHYHD1Q5SRE7 291 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF322Q6U7Q0 402 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 SSX6Q7RTT6 188 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 GPR137CQ8N3F9 429 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 ZNF485Q8NCK3 441 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 OTOSQ8NHW6 89 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 GATAD2BQ8WXI9 593 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 BARHL1Q9BZE3 327 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 B3GAT2Q9NPZ5 323 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 SSR3Q9UNL2 185 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 COPS3Q9UNS2 423 aa12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 SMG1Q96Q15 3661 aaKnown RBP12.45□□□□□ -0.42
PDZRN3-210ENST00000492909 ARHGAP21Q5T5U3 1957 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 DHHO43323 396 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 SPARCP09486 303 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 CPEP16870 476 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 RPS27P42677 84 aaKnown RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 GUCA1AP43080 201 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 RIPPLY2Q5TAB7 128 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 GDPD3Q7L5L3 318 aa12.44□□□□□ -0.42
PDZRN3-210ENST00000492909 PHC2Q8IXK0 858 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms