RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 KLRC4-KLRK1H3BQV0 150 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 GPR171O14626 319 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 NKX2-8O15522 239 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 HPGDSO60760 199 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC19A2O60779 497 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 GLSO94925 669 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 H2BFMP0C1H6 154 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 OCM2P0CE71 109 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 RFC3P40938 356 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 EIF1AXP47813 144 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 STARP49675 285 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF133P52736 654 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 ARG2P78540 354 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 IFITM3Q01628 133 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 MFGE8Q08431 387 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 CDC20Q12834 499 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SRSF6Q13247 344 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 RTP5Q14D33 572 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 KCNMB1Q16558 191 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 C10orf128Q5T292 105 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 CNIH2Q6PI25 160 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 KLHL24Q6TFL4 600 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 FAM131AQ6UXB0 335 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 Q6ZNX1 250 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 ASCL5Q7RTU5 278 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 GALNTL5Q7Z4T8 443 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 NR2C2APQ86WQ0 139 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 CATSPERDQ86XM0 798 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 LYSMD2Q8IV50 215 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 TMEM123Q8N131 208 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 PRSS35Q8N3Z0 413 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 TMEM251Q8N6I4 163 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 TMEM178AQ8NBL3 297 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 OR2AJ1Q8NGZ0 328 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 GPR148Q8TDV2 347 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 RNF133Q8WVZ7 376 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC39A7Q92504 469 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 CPNE4Q96A23 557 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 INTS12Q96CB8 462 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SLAMF6Q96DU3 332 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SCMH1Q96GD3 660 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 DIRAS2Q96HU8 199 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF385AQ96PM9 386 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SRRQ9GZT4 340 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC25A18Q9H1K4 315 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 SEC61A2Q9H9S3 476 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 EMC7Q9NPA0 242 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 POLE4Q9NR33 117 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 DLL3Q9NYJ7 618 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 CYB5R1Q9UHQ9 305 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 GTF2A1LQ9UNN4 478 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 RCE1Q9Y256 329 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 UGT2A1Q9Y4X1 527 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 EP300Q09472 2414 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 CNTRLQ7Z7A1 2325 aa8.12□□□□□ -1.11
SMARCC1-208ENST00000492896 NCOA6Q14686 2063 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 hCG_2014768A0A024R1R8 64 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 A0A087WV48 116 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 TRBV5-7A0A0A0MS05 114 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 FABP12A6NFH5 140 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 FAM25AB3EWG3 89 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 FAM25CB3EWG5 89 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 FAM25GB3EWG6 89 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF878C9JN71 531 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ACOT7O00154 380 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 PIN1P1O15428 100 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 CYTIPO60759 359 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 SLC43A1O75387 559 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 SRSF10O75494 262 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 PNPP00491 289 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 OCMP0CE72 109 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 AZGP1P25311 298 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 APEX1P27695 318 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 THBS2P35442 1172 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 MAGEA5P43359 124 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 SOX2P48431 317 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 LHX2P50458 406 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF84P51523 738 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 SUCLG1P53597 346 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 DEFA1P59665 94 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 DEFA3P59666 94 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 CLN3Q13286 438 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF79Q15937 498 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 HYAL4Q2M3T9 481 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 TRIM16LQ309B1 348 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 ZNF766Q5HY98 468 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 STEAP3Q658P3 488 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 LRFN4Q6PJG9 635 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 CORO6Q6QEF8 472 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 METAP1DQ6UB28 335 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 DCDC5Q6ZRR9 648 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 FOXL2NBQ6ZUU3 175 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 C20orf196Q8IYI0 205 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 IL17RDQ8NFM7 739 aa8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 TRMT10AQ8TBZ6 339 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 TSEN15Q8WW01 171 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-208ENST00000492896 HAS2Q92819 552 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms