RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 STOMP27105 288 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 APEX1P27695 318 aaKnown RBP12.1□□□□□ -0.47
CCM2-217ENST00000492883 TTKP33981 857 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 ESRRGP62508 458 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 TEKQ02763 1124 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 HGFACQ04756 655 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 DAG1Q14118 895 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 MEP1BQ16820 701 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 TBC1D28Q2M2D7 210 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 KDM4DQ6B0I6 523 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 MUC15Q8N387 334 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 PARP8Q8N3A8 854 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 OR51L1Q8NGJ5 315 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 OR9Q1Q8NGQ5 310 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 MBD6Q96DN6 1003 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 PLEKHA8Q96JA3 519 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 RBM4Q9BWF3 364 aaKnown RBP12.1□□□□□ -0.47
CCM2-217ENST00000492883 CXorf56Q9H5V9 222 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 CA10Q9NS85 328 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
CCM2-217ENST00000492883 ENOPH1Q9UHY7 261 aa12.1□□□□□ -0.47
CCM2-217ENST00000492883 ERICH4A6NGS2 130 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 SMPD2O60906 423 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 GAAP10253 952 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 ZNF823P16415 610 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 PAICSP22234 425 aaKnown RBP12.09□□□□□ -0.47
CCM2-217ENST00000492883 NR4A1P22736 598 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 IGFBP5P24593 272 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 GDI2P50395 445 aaKnown RBP12.09□□□□□ -0.47
CCM2-217ENST00000492883 ART1P52961 327 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 SLC25A1P53007 311 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 SNTB2Q13425 540 aaKnown RBP12.09□□□□□ -0.47
CCM2-217ENST00000492883 AQP6Q13520 282 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 PTGES3Q15185 160 aaKnown RBP12.09□□□□□ -0.47
CCM2-217ENST00000492883 ZNF774Q6NX45 483 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 NUP37Q8NFH4 326 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 SLC26A10Q8NG04 563 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 OR2AJ1Q8NGZ0 328 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 RBM4BQ9BQ04 359 aaKnown RBP12.09□□□□□ -0.47
CCM2-217ENST00000492883 OSBPL10Q9BXB5 764 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 WNT5BQ9H1J7 359 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 SLC25A19Q9HC21 320 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 TVP23BQ9NYZ1 205 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 ASH2LQ9UBL3 628 aa12.09□□□□□ -0.47
CCM2-217ENST00000492883 EIF3KQ9UBQ5 218 aaKnown RBP12.09□□□□□ -0.47
CCM2-217ENST00000492883 FAM183AA6NL82 134 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 PRR23D1E9PI22 279 aaPredicted RBP12.08□□□□□ -0.48
CCM2-217ENST00000492883 SURF4O15260 269 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 TMCC2O75069 709 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 TFP02787 698 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 GYPBP06028 91 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 OR4A8P0C604 315 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 PRR23D2P0DMB1 279 aaPredicted RBP12.08□□□□□ -0.48
CCM2-217ENST00000492883 SPI1P17947 270 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 FMO3P31513 532 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 THBS4P35443 961 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 SERPINF1P36955 418 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 BLVRAP53004 296 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 SNAPC1Q16533 368 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 PLBD1Q6P4A8 553 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 PQLC1Q8N2U9 271 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 GJC3Q8NFK1 279 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 OR6K6Q8NGW6 343 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 ZNRF4Q8WWF5 429 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 CIB1Q99828 191 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 TRAF4Q9BUZ4 470 aaPredicted RBP12.08□□□□□ -0.48
CCM2-217ENST00000492883 PRRG3Q9BZD7 231 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 NMNAT2Q9BZQ4 307 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 OR51V1Q9H2C8 321 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 MED20Q9H944 212 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 PLEK2Q9NYT0 353 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 ORC6Q9Y5N6 252 aa12.08□□□□□ -0.48
CCM2-217ENST00000492883 ANKHD1Q8IWZ3 2542 aaKnown RBP12.08□□□□□ -0.48
CCM2-217ENST00000492883 C5orf49A4QMS7 147 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 TVP23AA6NH52 213 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 RER1O15258 196 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 SGCEO43556 437 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 DOK2O60496 412 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 SNAP29O95721 258 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 CD8AP01732 235 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 FAM157BP0CG42 384 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 CLUP10909 449 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 BMP4P12644 408 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 RAD52P43351 418 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 ADAM8P78325 824 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 NKX6-1P78426 367 aaPredicted RBP12.07□□□□□ -0.48
CCM2-217ENST00000492883 PPP2R2BQ00005 443 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 ADIPOQQ15848 244 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 CORO6Q6QEF8 472 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 DTX2Q86UW9 622 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 PAQR4Q8N4S7 273 aaPredicted RBP12.07□□□□□ -0.48
CCM2-217ENST00000492883 PTP4A1Q93096 173 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 POM121L2Q96KW2 1035 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 FOXC2Q99958 501 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 OR51B6Q9H340 312 aa12.07□□□□□ -0.48
CCM2-217ENST00000492883 RIBC2Q9H4K1 309 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms