RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	OR4F3	Q6IEY1	312 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	C5orf46	Q6UWT4	87 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	LRRC74B	Q6ZQY2	392 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	HIST3H2A	Q7L7L0	130 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	NLRC3	Q7RTR2	1065 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	NET1	Q7Z628	596 aa	Predicted RBP	4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	RNF130	Q86XS8	419 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	PTOV1	Q86YD1	416 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	EPHX4	Q8IUS5	362 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	RIMKLA	Q8IXN7	391 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF101	Q8IZC7	436 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	GPR137C	Q8N3F9	429 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	CADM2	Q8N3J6	435 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	KRTCAP2	Q8N6L1	136 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	DTX3	Q8N9I9	347 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	SCAI	Q8N9R8	606 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF511	Q8NB15	262 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	OR8B3	Q8NGG8	313 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	DYDC1	Q8WWB3	177 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	HIST1H2AC	Q93077	130 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	ZBTB9	Q96C00	473 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	PPP1R36	Q96LQ0	422 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	OR5M11	Q96RB7	305 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	OR8B2	Q96RD0	313 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	SIGLEC11	Q96RL6	698 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF607	Q96SK3	696 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	DDO	Q99489	341 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	NKX3-1	Q99801	234 aa	Predicted RBP	4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	MYLK2	Q9H1R3	596 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	RABEP2	Q9H5N1	569 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	EVA1A	Q9H8M9	152 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	CDH20	Q9HBT6	801 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	SERTAD4	Q9NUC0	356 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	MRGBP	Q9NV56	204 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	ADPRHL2	Q9NX46	363 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	MIOX	Q9UGB7	285 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	KCNG2	Q9UJ96	466 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	RASD1	Q9Y272	281 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	TMED7	Q9Y3B3	224 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	GPR45	Q9Y5Y3	372 aa		4.4	□□□□□ -1.71
SEC13-219	ENST00000492602	TMEM72	A0PK05	275 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF726	A6NNF4	738 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	NPIPB9	F8W1W9	429 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602		H3BUX3	64 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	AP3D1	O14617	1153 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	UBD	O15205	165 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	DNAJA2	O60884	412 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	UGT2B17	O75795	530 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	PAH	P00439	452 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	SERPINA5	P05154	406 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	QDPR	P09417	244 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	PATE4	P0C8F1	98 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	KIT	P10721	976 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	PNMT	P11086	282 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF43	P17038	809 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	IFNA8	P32881	189 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	VEGFC	P49767	419 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	AQP5	P55064	265 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	UCP2	P55851	309 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	CLDN17	P56750	224 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ARF6	P62330	175 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	FUT5	Q11128	374 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	SKP2	Q13309	424 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	PMS2P3	Q13401	168 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	CASP8	Q14790	479 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	MAPK14	Q16539	360 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	C4orf48	Q5BLP8	95 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	WDR25	Q64LD2	544 aa	Predicted RBP	4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	KCTD18	Q6PI47	426 aa	Predicted RBP	4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	UNQ6126/PRO20091	Q6UXV3	157 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF813	Q6ZN06	617 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	MSANTD1	Q6ZTZ1	278 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	CCDC121	Q6ZUS5	278 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	OVCH2	Q7RTZ1	564 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ANKRD46	Q86W74	232 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF584	Q8IVC4	421 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	CLECL1	Q8IZS7	167 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	MIER2	Q8N344	545 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	C10orf53	Q8N6V4	93 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	LINC00482	Q8N8I6	264 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ANKRD42	Q8N9B4	389 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC30A7	Q8NEW0	376 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	OR1J1	Q8NGS3	322 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	OR52P1P	Q8NH57	321 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	LINC00476	Q8WZB0	136 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	CCDC115	Q96NT0	180 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	EPYC	Q99645	322 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ARHGDIG	Q99819	225 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	MCRIP2	Q9BUT9	160 aa	Known RBP	4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	PARD6B	Q9BYG5	372 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	NUF2	Q9BZD4	464 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	BCL2L14	Q9BZR8	327 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	SLC19A3	Q9BZV2	496 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	NPFFR1	Q9GZQ6	430 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	ZNF350	Q9GZX5	532 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	MEAF6	Q9HAF1	191 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	TMEM27	Q9HBJ8	222 aa		4.39	□□□□□ -1.71
SEC13-219	ENST00000492602	MSL2	Q9HCI7	577 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms