RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 COMMD4Q9H0A8 199 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SLC25A18Q9H1K4 315 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SLC26A1Q9H2B4 701 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RANGRFQ9HD47 186 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 C20orf141Q9NUB4 165 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ACER3Q9NUN7 267 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 KCNN3Q9UGI6 736 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 HRH3Q9Y5N1 445 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CDH10Q9Y6N8 788 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CADP27708 2225 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 IGKV3D-11A0A0A0MRZ8 115 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1W2PNU3 283 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 PRAMEF27A3QJZ7 478 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 OR6C65A6NJZ3 312 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF670-ZNF695F2Z2N8 137 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ARPC5O15511 151 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF354AO60765 605 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TGM6O95932 706 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 IFNA21P01568 189 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 IGKV3-11P04433 115 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 FBXO45P0C2W1 286 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 PGAM2P15259 253 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 AGTR1P30556 359 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 MGAT2Q10469 447 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ACKR1Q16570 336 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TBR1Q16650 682 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF791Q3KP31 576 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 KLHL26Q53HC5 615 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RFPL4BQ6ZWI9 263 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 KCTD9Q7L273 389 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 GTPBP8Q8N3Z3 284 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ABHD3Q8WU67 409 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TAAR8Q969N4 342 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 PGAM5Q96HS1 289 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 FCRL1Q96LA6 429 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 AP1S3Q96PC3 154 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF416Q9BWM5 594 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CHST11Q9NPF2 352 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TRIM36Q9NQ86 728 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CORINQ9Y5Q5 1042 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ARID1AO14497 2285 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 IGLV3-12A0A075B6K2 115 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF587BE7ETH6 402 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RBMXL2O75526 392 aaKnown RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RBBP9O75884 186 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 LYZL6O75951 148 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SLC2A10O95528 541 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SLC2A1P11166 492 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 S1PR1P21453 382 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 DCKP27707 260 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 DAPP51397 102 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 GLO1Q04760 184 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TSPAN31Q12999 210 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CDK5R2Q13319 367 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 MRPL49Q13405 166 aaKnown RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ARFRP1Q13795 201 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RTP5Q14D33 572 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SPCS2Q15005 226 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SEC23BQ15437 767 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 PLEKHN1Q494U1 663 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 OXLD1Q5BKU9 147 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ATAD3CQ5T2N8 411 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 RPL13AP3Q6NVV1 102 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CORO6Q6QEF8 472 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF627Q7L945 461 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 NRARPQ7Z6K4 114 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TSPYL5Q86VY4 417 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 TMEM185AQ8NFB2 350 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 OR4D11Q8NGI4 311 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 OR8J1Q8NGP2 316 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 NPRL2Q8WTW4 380 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SMAP2Q8WU79 429 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 ZBTB8AQ96BR9 441 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 UBL7Q96S82 380 aaPredicted RBP4.03□□□□□ -1.76
TRA2B-215ENST00000492417 CRLF2Q9HC73 371 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 EMC7Q9NPA0 242 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 GSKIPQ9P0R6 139 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 SCP2D1Q9UJQ7 156 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 KLK4Q9Y5K2 254 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 HSPE1-MOB4S4R3N1 261 aa4.03□□□□□ -1.76
TRA2B-215ENST00000492417 A0A1W2PQ09 198 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 hCG_1807616A0A1W2PRN6 198 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 C7orf72A4D263 438 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 KRBOX1C9JBD0 128 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 NPIPB8E9PQR5 432 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TSTD3H0UI37 97 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CTDSP2O14595 271 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SPDEFO95238 335 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 CD14P08571 375 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 QDPRP09417 244 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SFTPCP11686 197 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 B4GALT1P15291 398 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 TUBG1P23258 451 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 APLNRP35414 380 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 PSMB10P40306 273 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 SNU13P55769 128 aaKnown RBP4.02□□□□□ -1.77
TRA2B-215ENST00000492417 FXYD6P3P58550 94 aa4.02□□□□□ -1.77
TRA2B-215ENST00000492417 S100A10P60903 97 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms