RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 NANOS1Q8WY41 292 aaKnown RBP13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 EME1Q96AY2 570 aa13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 TEX12Q9BXU0 123 aa13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 PRRG3Q9BZD7 231 aa13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 SIAEQ9HAT2 523 aa13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 CRNNQ9UBG3 495 aaPredicted RBP13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 FKBP7Q9Y680 259 aa13.05□□□□□ -0.32
CDC42SE1-205ENST00000491825 IGLV1-36A0A0B4J1U3 117 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 ZAR1LA6NP61 321 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 CASQ2O14958 399 aaPredicted RBP13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 SURF4O15260 269 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 SLC16A7O60669 478 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 KHDRBS3O75525 346 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 UBL3O95164 117 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 HMGN1P05114 100 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 SLC25A1P53007 311 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 CDH11P55287 796 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 CRMP1Q14194 572 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 PTGES3Q15185 160 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 ACSM5Q6NUN0 579 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 OR6V1Q8N148 313 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 SLC37A3Q8NCC5 494 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 NSMAFQ92636 917 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 REG4Q9BYZ8 158 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 NMNAT2Q9BZQ4 307 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 RPRD1BQ9NQG5 326 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 B3GNT2Q9NY97 397 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 ZNF224Q9NZL3 707 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 ORC6Q9Y5N6 252 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 ATRQ13535 2644 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 CADP27708 2225 aa13.04□□□□□ -0.32
CDC42SE1-205ENST00000491825 FBN3Q75N90 2809 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 SONP18583 2426 aaKnown RBP13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 DCTN6O00399 190 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 ABCD4O14678 606 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 IGKV3-15P01624 115 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 MSR1P21757 451 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 PTDSS1P48651 473 aaKnown RBP13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 RAD23AP54725 363 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 GLO1Q04760 184 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 NPRL3Q12980 569 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 FAM27BQ5VT28 67 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 SLX4IPQ5VYV7 408 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 C11orf71Q6IPW1 123 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 ZBTB49Q6ZSB9 765 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 OR2T4Q8NH00 348 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 RDH12Q96NR8 316 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 SLC38A2Q96QD8 506 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 WACQ9BTA9 647 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 POLE4Q9NR33 117 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 GDF2Q9UK05 429 aaPredicted RBP13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 B9D1Q9UPM9 204 aa13.03□□□□□ -0.32
CDC42SE1-205ENST00000491825 A0A096LNT2 108 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 A0A1W2PPL8 197 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 A0A1W2PR80 420 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 E9PQ18 207 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 H0YHG0 523 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 IGLV1-44P01699 117 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 GAAP10253 952 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 PAICSP22234 425 aaKnown RBP13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 LAP3P28838 519 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 EPHA2P29317 976 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 CDAP32320 146 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 ARR3P36575 388 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 GUCA1AP43080 201 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 SPOCK1Q08629 439 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 TRIP10Q15642 601 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 KCNMB1Q16558 191 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 GSG1Q2KHT4 349 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 SLC36A2Q495M3 483 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 C12orf73Q69YU5 71 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 TMEM108Q6UXF1 575 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 SLC16A14Q7RTX9 510 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 SKA3Q8IX90 412 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 TSSK2Q96PF2 358 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 SLC29A1Q99808 456 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 FN3KQ9H479 309 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 RNPEPL1Q9HAU8 725 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 FBXL3Q9UKT7 428 aa13.02□□□□□ -0.33
CDC42SE1-205ENST00000491825 SVEP1Q4LDE5 3571 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 E7EQL1 145 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 HLA-HP01893 362 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 CST2P09228 141 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 MMP7P09237 267 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 CBR1P16152 277 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 PTAFRP25105 342 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 PEX2P28328 305 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 CENPAP49450 140 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 LSM6P62312 80 aaKnown RBP13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 OGFRL1Q5TC84 451 aaPredicted RBP13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 TMEM236Q5W0B7 351 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 B3GLCTQ6Y288 498 aa13.01□□□□□ -0.33
CDC42SE1-205ENST00000491825 SYT9Q86SS6 491 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms