RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 H3BML4 177 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 C19orf84I3L1E1 186 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 EFNA2O43921 213 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 PEPDP12955 493 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 GP1BBP13224 206 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 CD53P19397 219 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 NPR2P20594 1047 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 AGAP20933 346 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 P2RX1P51575 399 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 IKZF1Q13422 519 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 FGFBP1Q14512 234 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 TRAM1Q15629 374 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 B3GLCTQ6Y288 498 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 PLEKHM3Q6ZWE6 761 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ADGRE4PQ86SQ3 457 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 NR2C2APQ86WQ0 139 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 PM20D2Q8IYS1 436 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 OR8H3Q8N146 312 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF680Q8NEM1 530 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 OR51G2Q8NGK0 314 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 GPR119Q8TDV5 335 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 TRIB1Q96RU8 372 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ALG8Q9BVK2 526 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 GHITMQ9H3K2 345 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 POLE3Q9NRF9 147 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 EIF3KQ9UBQ5 218 aaKnown RBP8.39□□□□□ -1.07
BRCA1-219ENST00000491747 SPEF1Q9Y4P9 236 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF264O43296 627 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 EEF1E1O43324 174 aaKnown RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 FRS3O43559 492 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 LANCL1O43813 399 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 ADAM11O75078 769 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 OPN1LWP04000 364 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 RAF1P04049 648 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 EIF4EP06730 217 aaKnown RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 HOXD4P09016 255 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 UBL4AP11441 157 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 PRKAR1BP31321 381 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 GPR4P46093 362 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 RGS8P57771 180 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 SKP2Q13309 424 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 NSUN5P2Q63ZY6 315 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 SFXN4Q6P4A7 337 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 CXXC5Q7LFL8 322 aaKnown RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 HDDC2Q7Z4H3 204 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 CPOQ8IVL8 374 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 NRMQ8IXM6 262 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 BBS1Q8NFJ9 593 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 OR11H7Q8NGC8 314 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 ZPLD1Q8TCW7 415 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 PIGQQ9BRB3 760 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 CLEC4MQ9H2X3 399 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 OR51J1Q9H342 316 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 ISG20L2Q9H9L3 353 aaKnown RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 HINT3Q9NQE9 182 aaKnown RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 RASD1Q9Y272 281 aa8.38□□□□□ -1.07
BRCA1-219ENST00000491747 SPTAN1Q13813 2472 aaKnown RBP8.38□□□□□ -1.07
BRCA1-219ENST00000491747 TEX13CA0A0J9YWL9 993 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 A0A1B0GVI7 797 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 NKX2-6A6NCS4 301 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 J3QRE1 110 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CLDN14O95500 239 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CSTAP01040 98 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 TCRBP04435 133 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 RPS4Y1P22090 263 aaKnown RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CEACAM8P31997 349 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 BTCP35070 178 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 HSF2Q03933 536 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 FOXF1Q12946 379 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 MBOAT2Q6ZWT7 520 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 GGNQ86UU5 652 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 VRK2Q86Y07 508 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 NKAIN4Q8IVV8 208 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 GTPBP8Q8N3Z3 284 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 TOMM5Q8N4H5 51 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 C9orf106Q8NAJ2 232 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 FAM71CQ8NEG0 241 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 LRRC20Q8TCA0 184 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 LAT2Q9GZY6 243 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 FN3KQ9H479 309 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 NARFLQ9H6Q4 476 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 CACYBPQ9HB71 228 aaKnown RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 INPP5EQ9NRR6 644 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 AUP1Q9Y679 476 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 A0A087WZY1 265 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 DAPL1A0PJW8 107 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 FAM183AA6NL82 134 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 PRSS44E7EML9 344 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 KLF4O43474 513 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 EIF4E2O60573 245 aaKnown RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 FZD7O75084 574 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 OR5F1O95221 314 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 NUDT14O95848 222 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 IFNA7P01567 189 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 TFPIP10646 304 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 POU3F2P20265 443 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-219ENST00000491747 SHC1P29353 583 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 PTGER4P35408 488 aa8.37□□□□□ -1.07
BRCA1-219ENST00000491747 THBS2P35442 1172 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms