RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 MRPL33O75394 65 aaKnown RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ZIC2O95409 532 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 TMEM225BP0DP42 221 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ALOX5APP20292 161 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 RAP2BP61225 183 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 MESTQ5EB52 335 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 TMPRSS9Q7Z410 1059 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ADGRG3Q86Y34 549 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 NLGN4YQ8NFZ3 816 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 FGGYQ96C11 551 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 DERL3Q96Q80 235 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 F5H5P2 479 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 KLRC4-KLRK1H3BQV0 150 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ITGB2P05107 769 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 MSL3P1P0C860 447 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 CCNOP22674 350 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 CD79BP40259 229 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 TAS2R20P59543 309 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 SRYQ05066 204 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ZP4Q12836 540 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 MYBPHQ13203 477 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 TMPPEQ6ZT21 453 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 OR2T35Q8NGX2 323 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 COQ8AQ8NI60 647 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 C4orf45Q96LM5 186 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 NECAB3Q96P71 396 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 PHB2Q99623 299 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 C20orf85Q9H1P6 137 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 TSPAN10Q9H1Z9 355 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 GALNT9Q9HCQ5 603 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 GPR27Q9NS67 375 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 RBM7Q9Y580 266 aaKnown RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ANKRD61A6NGH8 418 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 OR6C65A6NJZ3 312 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 E9PI62 339 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 CTDSPLO15194 276 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ZFPL1O95159 310 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 THY1P04216 161 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 CDK2P24941 298 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ZNF93P35789 620 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 ZXDAP98168 799 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 CYCSP99999 105 aaKnown RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 MFAP5Q13361 173 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 NKAPLQ5M9Q1 402 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 OR1M1Q8NGA1 313 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 OR10G3Q8NGC4 313 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 EMC6Q9BV81 110 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 TAS2R4Q9NYW5 299 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 PILRBQ9UKJ0 227 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 MRPS28Q9Y2Q9 187 aaKnown RBP6.62□□□□□ -1.35
NPHP3-208ENST00000490993 KCNIP3Q9Y2W7 256 aa6.62□□□□□ -1.35
NPHP3-208ENST00000490993 IGKV3-11P04433 115 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 LPLP06858 475 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SPNP16150 400 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 RBMXP38159 391 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 CX3CR1P49238 355 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ATP1B3P54709 279 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ARG2P78540 354 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 DGCR2P98153 550 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SSPNQ14714 243 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 FAM27D1Q5T7N8 215 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 TMEM91Q6ZNR0 172 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SLC16A14Q7RTX9 510 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 OR13C9Q8NGT0 318 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SAP25Q8TEE9 199 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ASB10Q8WXI3 467 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 THOC3Q96J01 351 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ARRDC1-AS1Q9H2J1 176 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 MIXL1Q9H2W2 232 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 MED29Q9NX70 200 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ZNF106Q9H2Y7 1883 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 CCDC187A0A096LP49 1063 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 IGKV3D-11A0A0A0MRZ8 115 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 A0A1W2PNR3 127 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 GGT3PA6NGU5 568 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SLC17A2O00624 439 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 XRCC3O43542 346 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ATF1P18846 271 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 HERV-K104P61576 105 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 SQSTM1Q13501 440 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 EIF5AL1Q6IS14 154 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 MTFR2Q6P444 385 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 LRRC69Q6ZNQ3 347 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 BEST3Q8N1M1 668 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 DTWD2Q8NBA8 298 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 OR2Y1Q8NGV0 311 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ZC3HAV1LQ96H79 300 aaKnown RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 RNF32Q9H0A6 362 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ZNF701Q9NV72 531 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 VSX1Q9NZR4 365 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 ST6GALNAC2Q9UJ37 374 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 LRP12Q9Y561 859 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 PCM1Q15154 2024 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 KIAA1671Q9BY89 1806 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 LOC100509620A0A075B734 347 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 TEX13DA0A0J9YY54 714 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-208ENST00000490993 H0YC42 278 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 STK17BO94768 372 aa6.61□□□□□ -1.35
NPHP3-208ENST00000490993 C1QBP02746 253 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms