RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 RAG2P55895 527 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 PAX2Q02962 417 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 FMODQ06828 376 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 TAF11Q15544 211 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 DEFB112Q30KQ8 113 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 PAGE3Q5JUK9 113 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 ZNF362Q5T0B9 420 aaPredicted RBP11.71□□□□□ -0.53
VARS-227ENST00000489979 OLFML2AQ68BL7 652 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 BRICD5Q6PL45 260 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 BTNL3Q6UXE8 466 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 HDDC2Q7Z4H3 204 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 FUNDC1Q8IVP5 155 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 OR2Z1Q8NG97 314 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 GPR32P1Q8NGA4 272 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 OR4D11Q8NGI4 311 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 OR4F5Q8NH21 305 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 VANGL1Q8TAA9 524 aaPredicted RBP11.71□□□□□ -0.53
VARS-227ENST00000489979 ITLN1Q8WWA0 313 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 UPRTQ96BW1 309 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 NMD3Q96D46 503 aaKnown RBP11.71□□□□□ -0.53
VARS-227ENST00000489979 CITED1Q99966 193 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 ZNF426Q9BUY5 554 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 OR2H1Q9GZK4 316 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 NANOGQ9H9S0 305 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 ELOVL3Q9HB03 270 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 IL20RAQ9UHF4 553 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 GMEB1Q9Y692 573 aa11.71□□□□□ -0.53
VARS-227ENST00000489979 TRBV5-3A0A0A0MS03 114 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 TRAPPC13A5PLN9 417 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 EVPLLA8MZ36 301 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 SRRM5B3KS81 715 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 ICMTO60725 284 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 CRYBA1P05813 215 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 WNT2P09544 360 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 GPX2P18283 190 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 AQP2P41181 271 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 PCBP3P57721 371 aaKnown RBP11.7□□□□□ -0.54
VARS-227ENST00000489979 TNFAIP8L3Q5GJ75 292 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 LRRN1Q6UXK5 716 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 Q6ZR03 302 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 RHOUQ7L0Q8 258 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 ZER1Q7Z7L7 766 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 ALDH16A1Q8IZ83 802 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 MUC20Q8N307 709 aaPredicted RBP11.7□□□□□ -0.54
VARS-227ENST00000489979 OR10S1Q8NGN2 331 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 HDAC2Q92769 488 aaKnown RBP11.7□□□□□ -0.54
VARS-227ENST00000489979 SPDL1Q96EA4 605 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 MPP4Q96JB8 637 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 C4orf45Q96LM5 186 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
VARS-227ENST00000489979 POFUT1Q9H488 388 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 MEPEQ9NQ76 525 aaPredicted RBP11.7□□□□□ -0.54
VARS-227ENST00000489979 INIPQ9NRY2 104 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.7□□□□□ -0.54
VARS-227ENST00000489979 CORO2BQ9UQ03 480 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 PPP1R3CQ9UQK1 317 aa11.7□□□□□ -0.54
VARS-227ENST00000489979 IGHV2-70DA0A0C4DH43 119 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 TMEM178BH3BS89 294 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 M0QX08 132 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 TIMM23O14925 209 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 FUT1P19526 365 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 LAP3P28838 519 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 KRTAP10-3P60369 221 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 STX1BP61266 288 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 RELBQ01201 579 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 CD47Q08722 323 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 ARMC4Q5T2S8 1044 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 FAM27BQ5VT28 67 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 ZNF774Q6NX45 483 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 SLC25A47Q6Q0C1 308 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 BLOC1S3Q6QNY0 202 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 FIP1L1Q6UN15 594 aaKnown RBP11.69□□□□□ -0.54
VARS-227ENST00000489979 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 PTOV1Q86YD1 416 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 MREGQ8N565 214 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 POU5F2Q8N7G0 328 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 MOSPD2Q8NHP6 518 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 RAB40AQ8WXH6 277 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 THOC1Q96FV9 657 aaKnown RBP11.69□□□□□ -0.54
VARS-227ENST00000489979 PRSS27Q9BQR3 290 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 MARCH7Q9H992 704 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 SMURF2Q9HAU4 748 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 MAN2C1Q9NTJ4 1040 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 STX18Q9P2W9 335 aaKnown RBP11.69□□□□□ -0.54
VARS-227ENST00000489979 IL19Q9UHD0 177 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 TIMM10BQ9Y5J6 103 aa11.69□□□□□ -0.54
VARS-227ENST00000489979 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
VARS-227ENST00000489979 OR7A10O76100 309 aa11.68□□□□□ -0.54
VARS-227ENST00000489979 NDUFA7O95182 113 aa11.68□□□□□ -0.54
VARS-227ENST00000489979 ZNF205O95201 554 aa11.68□□□□□ -0.54
VARS-227ENST00000489979 ABHD16AO95870 558 aa11.68□□□□□ -0.54
VARS-227ENST00000489979 CST2P09228 141 aa11.68□□□□□ -0.54
VARS-227ENST00000489979 RPS2P15880 293 aaKnown RBP11.68□□□□□ -0.54
VARS-227ENST00000489979 GSTM3P21266 225 aa11.68□□□□□ -0.54
VARS-227ENST00000489979 MRPL19P49406 292 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms