RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 HNRNPA0Q13151 305 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ANKDD1AQ495B1 522 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 FAM205BPQ63HN1 556 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 TMPRSS11FQ6ZWK6 438 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 FAM122BQ7Z309 247 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ARPINQ7Z6K5 226 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 OR51F2Q8NH61 342 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 GEMIN6Q8WXD5 167 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 HSH2DQ96JZ2 352 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 POLE4Q9NR33 117 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 EIF3KQ9UBQ5 218 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 WIPI2Q9Y4P8 454 aa16.48■□□□□ 0.23
TNFRSF1B-202ENST00000489921 A6NIZ1 184 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 SPRY3O43610 288 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 UBOX5O94941 541 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 VENTXO95231 258 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ZNF682O95780 498 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 SERPINA1P01009 418 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ADH4P08319 380 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 IFNA8P32881 189 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 GPR4P46093 362 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 SLC9A3P48764 834 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 RAP1BP61224 184 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 PPP1CBP62140 327 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 RAP1AP62834 184 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 IFI44LQ53G44 452 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 MESTQ5EB52 335 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 FAM209AQ5JX71 171 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 SLC7A13Q8TCU3 470 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 Q96M85 177 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 HOPXQ9BPY8 73 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 POFUT1Q9H488 388 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 METTL17Q9H7H0 456 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 SAP30LQ9HAJ7 183 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 NMNAT1Q9HAN9 279 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 DECR2Q9NUI1 292 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 METRNQ9UJH8 293 aa16.47■□□□□ 0.23
TNFRSF1B-202ENST00000489921 WNK2Q9Y3S1 2297 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 TRAV20A0A0B4J274 112 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 A0A1W2PPL8 197 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 PLPP2O43688 288 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 PTP4A3O75365 173 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 IGHV2-5P01817 119 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 CD14P08571 375 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 MSR1P21757 451 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 GCH1P30793 250 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 RBMXP38159 391 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 TEKQ02763 1124 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ZBED5Q49AG3 693 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ACSM5Q6NUN0 579 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ZNF730Q6ZMV8 503 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 SYT9Q86SS6 491 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ALDH16A1Q8IZ83 802 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 SEMA6DQ8NFY4 1073 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 ABHD4Q8TB40 342 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 C4orf45Q96LM5 186 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 EMC7Q9NPA0 242 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 GRIP1Q9Y3R0 1128 aa16.46■□□□□ 0.23
TNFRSF1B-202ENST00000489921 IMPA2O14732 288 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 MT-ND5P03915 603 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 NCK1P16333 377 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 FXYD6P3P58550 94 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 PCBD1P61457 104 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 PSG7Q13046 419 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 HFEQ30201 348 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 FAHD2BQ6P2I3 314 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 HACD2Q6Y1H2 254 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 C1orf174Q8IYL3 243 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 FAHD2AQ96GK7 314 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 TMPRSS13Q9BYE2 586 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 EFCAB1Q9HAE3 211 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 ABCD2Q9UBJ2 740 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 ENPP4Q9Y6X5 453 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 DYSFO75923 2080 aa16.45■□□□□ 0.22
TNFRSF1B-202ENST00000489921 CLDN25C9JDP6 229 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 H3BSA7 217 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 GSTA4O15217 222 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 TPD52L2O43399 206 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 MPZL1O95297 269 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 PNPP00491 289 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 CD55P08174 381 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 COX5BP10606 129 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 CTLA4P16410 223 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 MDH1P40925 334 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 LIMS1P48059 325 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 OTPQ5XKR4 325 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 FKBP9P1Q75LS8 142 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 CCL17Q92583 94 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 ELMOD3Q96FG2 381 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 C7orf34Q96L11 122 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 ANKRD19PQ9H560 264 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 MSL2Q9HCI7 577 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 DCAF16Q9NXF7 216 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 GRHPRQ9UBQ7 328 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 SIGLEC7Q9Y286 467 aa16.44■□□□□ 0.22
TNFRSF1B-202ENST00000489921 LOC105371242A0A075B767 164 aa16.43■□□□□ 0.22
TNFRSF1B-202ENST00000489921 A0A1W2PRQ8 180 aa16.43■□□□□ 0.22
TNFRSF1B-202ENST00000489921 PRSS37A4D1T9 235 aa16.43■□□□□ 0.22
TNFRSF1B-202ENST00000489921 C12orf71A8MTZ7 269 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms