RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SMDT1Q9H4I9 107 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 GSX1Q9H4S2 264 aaPredicted RBP4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 PDFQ9HBH1 243 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SGK2Q9HBY8 427 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 MYNNQ9NPC7 610 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 GLRX2Q9NS18 164 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 POT1Q9NUX5 634 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 IL17BQ9UHF5 180 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SHPKQ9UHJ6 478 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 KCNG2Q9UJ96 466 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 PITPNC1Q9UKF7 332 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 YBX2Q9Y2T7 364 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 NOP16Q9Y3C1 178 aaKnown RBP4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 CSAG2Q9Y5P2 127 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 SLCO1B1Q9Y6L6 691 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 PRSS21Q9Y6M0 314 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 KIAA1671Q9BY89 1806 aa4.32□□□□□ -1.72
SNRNP40-206ENST00000489853 PLXNA1Q9UIW2 1896 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MCM3APO60318 1980 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TRBV5-4A0A0C4DH59 114 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 A0A1B0GW64 132 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 UNC119BA6NIH7 251 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 UMAD1C9J7I0 102 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 HSBP1L1C9JCN9 74 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 H7C4K7 107 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 M0R3H8 397 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 HMGN4O00479 90 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GAPDHSO14556 408 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 AGPAT2O15120 278 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 LDLRAD4O15165 306 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PIN1P1O15428 100 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 P2RX6O15547 441 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 HCRTR2O43614 444 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 LRP3O75074 770 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DNAJB6O75190 326 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DFFBO76075 338 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ETHE1O95571 254 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DIRAS3O95661 229 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TSPAN15O95858 294 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TK1P04183 234 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CD3DP04234 171 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CLTBP09497 229 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 OR5AC1P0C628 307 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC35G4P0C7Q5 338 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MPC1LP0DKB6 136 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 LYL1P12980 280 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CD22P20273 847 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 HNF1AP20823 631 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ZBTB25P24278 435 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 COL8A1P27658 744 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PCSK1P29120 753 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PRSS3P35030 304 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SNCAP37840 140 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 OR3A1P47881 315 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PNLIPRP1P54315 467 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CARD18P57730 90 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PFN3P60673 137 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RAP1BP61224 184 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 DLK1P80370 383 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ST3GAL3Q11203 375 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CDK5R1Q15078 307 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RAB35Q15286 201 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GUK1Q16774 197 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ODF4Q2M2E3 257 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM177Q53S58 311 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PRRT3Q5FWE3 981 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 KHDRBS2Q5VWX1 349 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FBXL22Q6P050 247 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FAHD2BQ6P2I3 314 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ANKRD16Q6P6B7 361 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CLEC2AQ6UVW9 174 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM205Q6UW68 189 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 RPTNQ6XPR3 784 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF620Q6ZNG0 422 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC35D2Q76EJ3 337 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GRASPQ7Z6J2 395 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 LYG2Q86SG7 212 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 BIVMQ86UB2 503 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC25A42Q86VD7 318 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PPP1R3BQ86XI6 285 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 MEX3DQ86XN8 651 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FOXRED2Q8IWF2 684 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GABRG1Q8N1C3 465 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SYS1Q8N2H4 156 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 JAGN1Q8N5M9 183 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 ZNF433Q8N7K0 673 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CLEC1AQ8NC01 280 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 CPEB3Q8NE35 698 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FIBINQ8TAL6 211 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 NPRL2Q8WTW4 380 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 AUTS2Q8WXX7 1259 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 OR5P2Q8WZ92 322 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FAHD2AQ96GK7 314 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 TMEM169Q96HH4 297 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 FAM46AQ96IP4 442 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SPATA33Q96N06 139 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SMIM14Q96QK8 99 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 GAL3ST4Q96RP7 486 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 SERINC2Q96SA4 455 aa4.31□□□□□ -1.72
SNRNP40-206ENST00000489853 PHB2Q99623 299 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms