RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 ZNF432O94892 652 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 AKR7A3O95154 331 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 OR6A2O95222 327 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 PMS2P2O95744 297 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 MT-CO3P00414 261 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 RAF1P04049 648 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 TACSTD2P09758 323 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 LIFP15018 202 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF19P17023 458 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 DCTDP32321 178 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ACVR1BP36896 505 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 NAA10P41227 235 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 EVX1P49640 407 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 GDI2P50395 445 aaKnown RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 CCR9P51686 369 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF41P51814 821 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF133P52736 654 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 DSCR4P56555 118 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 H3F3AP84243 136 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 MYBPHQ13203 477 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ATP1A4Q13733 1029 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF79Q15937 498 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 CSRP2Q16527 193 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 LPAL2Q16609 132 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 C3orf36Q3SXR2 165 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 TP53I3Q53FA7 332 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ACSM3Q53FZ2 586 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 FAM69BQ5VUD6 431 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 TIGD3Q6B0B8 471 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 MZT2AQ6P582 158 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 DNM1P34Q6PK57 102 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 XKRXQ6PP77 449 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 DEGS2Q6QHC5 323 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ARL9Q6T311 187 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 RHOUQ7L0Q8 258 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 HDDC2Q7Z4H3 204 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF248Q8NDW4 579 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 OR6K6Q8NGW6 343 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 SNX33Q8WV41 574 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 PSMF1Q92530 271 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 THRSPQ92748 146 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ATOH1Q92858 354 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ARL5BQ96KC2 179 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 IP6K3Q96PC2 410 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 TSSK2Q96PF2 358 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 INTS14Q96SY0 518 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 TBX5Q99593 518 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 NPAS1Q99742 590 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 MRI1Q9BV20 369 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 EDEM2Q9BV94 578 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 TMED9Q9BVK6 235 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 MRPL13Q9BYD1 178 aaKnown RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 OR11A1Q9GZK7 315 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 SYT4Q9H2B2 425 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 PPIL3Q9H2H8 161 aaKnown RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 PPP1R3EQ9H7J1 279 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 PTGES2Q9H7Z7 377 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 SACM1LQ9NTJ5 587 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 ACOXLQ9NUZ1 547 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 RABL2AQ9UBK7 228 aaPredicted RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 MRM2Q9UI43 246 aaKnown RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 KCNG2Q9UJ96 466 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 FBXL2Q9UKC9 423 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 RABL2BQ9UNT1 228 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 FARSAQ9Y285 508 aaKnown RBP4.94□□□□□ -1.62
ATG4A-208ENST00000489247 KLHDC2Q9Y2U9 406 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 BDP1A6H8Y1 2624 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 COL6A3P12111 3177 aa4.94□□□□□ -1.62
ATG4A-208ENST00000489247 SDK1Q7Z5N4 2213 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 MYO15AQ9UKN7 3530 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 NCOR1O75376 2440 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 TRBV5-7A0A0A0MS05 114 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 CD8B2A6NJW9 211 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 AQP7P3A6NL99 342 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 TMEM212A6NML5 194 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 OR4C45A6NMZ5 311 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 C4orf47A7E2U8 309 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF879B4DU55 563 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 CASKO14936 926 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 ARHGEF9O43307 516 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 TRAF3IP2O43734 574 aaPredicted RBP4.93□□□□□ -1.62
ATG4A-208ENST00000489247 ZIC3O60481 467 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 ZNF254O75437 659 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 SRSF10O75494 262 aaKnown RBP4.93□□□□□ -1.62
ATG4A-208ENST00000489247 CBR3O75828 277 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 VAMP5O95183 116 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 KRT8P05787 483 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 CELA2AP08217 269 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 CCL3P10147 92 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 CTLA4P16410 223 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 IL11P20809 199 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 MYL9P24844 172 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 CD82P27701 267 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 SHC1P29353 583 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 SRD5A2P31213 254 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 AGFG1P52594 562 aaKnown RBP4.93□□□□□ -1.62
ATG4A-208ENST00000489247 RRADP55042 308 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 NANOS3P60323 173 aaKnown RBP4.93□□□□□ -1.62
ATG4A-208ENST00000489247 HSF1Q00613 529 aa4.93□□□□□ -1.62
ATG4A-208ENST00000489247 TLE3Q04726 772 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms