RNA–Protein interactions for RNA: ENST00000488576.5

FAM107B-222, Transcript of family with sequence similarity 107 member B, human

TSL 4

Gene FAM107B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM107B-222	ENST00000488576	SORL1	Q92673	2214 aa		0.64	□□□□□ -2.31
FAM107B-222	ENST00000488576	COL11A1	P12107	1806 aa	Predicted RBP	0.64	□□□□□ -2.31
FAM107B-222	ENST00000488576	COL5A3	P25940	1745 aa	Predicted RBP	0.64	□□□□□ -2.31
FAM107B-222	ENST00000488576	ZNF407	Q9C0G0	2248 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	IGLV1-36	A0A0B4J1U3	117 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	CENPVL3	A0A0U1RRI6	287 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	SNN	O75324	88 aa	Predicted RBP	0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	H6PD	O95479	791 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	HSPA5	P11021	654 aa	Known RBP	0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	DCK	P27707	260 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	HSD17B2	P37059	387 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	EPS15	P42566	896 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	MAGEA8	P43361	318 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	RND2	P52198	227 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	TAS2R31	P59538	309 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	GPX6	P59796	221 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	BPIFB3	P59826	476 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	CRADD	P78560	199 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	TNFRSF9	Q07011	255 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	CDH17	Q12864	832 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	FAM222A	Q5U5X8	452 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	METTL21C	Q5VZV1	264 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	OR2A2	Q6IF42	318 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	ZNF101	Q8IZC7	436 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	APCDD1L	Q8NCL9	501 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	TMEM104	Q8NE00	496 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	HGD	Q93099	445 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	PTX4	Q96A99	478 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	SEH1L	Q96EE3	360 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	WDR34	Q96EX3	536 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	PIK3IP1	Q96FE7	263 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	PLEKHA8	Q96JA3	519 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	IP6K3	Q96PC2	410 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	KLF6	Q99612	283 aa	Predicted RBP	0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	COPS8	Q99627	209 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	TM2D3	Q9BRN9	247 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	SGK2	Q9HBY8	427 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	CBY1	Q9Y3M2	126 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	KIF3A	Q9Y496	699 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	MUC16	Q8WXI7	14507 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	KIF16B	Q96L93	1317 aa		0.63	□□□□□ -2.31
FAM107B-222	ENST00000488576	NACAD	O15069	1562 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576		A0A1W2PPE3	182 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	BTNL10	A8MVZ5	291 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	POLR1C	O15160	346 aa	Predicted RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	DPM1	O60762	260 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	SCGN	O76038	276 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	ERLIN2	O94905	339 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	IGLV6-57	P01721	117 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	CD3G	P09693	182 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	OR5H8	P0DN80	308 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	CD99	P14209	185 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	IL1RN	P18510	177 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	RAB3B	P20337	219 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	ACAA2	P42765	397 aa	Known RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	TPD52L1	Q16890	204 aa	Predicted RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	MPV17L2	Q567V2	206 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	AVPI1	Q5T686	147 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	AP1AR	Q63HQ0	302 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	WDR59	Q6PJI9	974 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	C16orf47	Q6ZP98	133 aa	Predicted RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576		Q6ZPB1	254 aa	Predicted RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	EGFL6	Q8IUX8	553 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	PSTK	Q8IV42	348 aa	Known RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	PRSS58	Q8IYP2	241 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	TMEM256	Q8N2U0	113 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	TRPV1	Q8NER1	839 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	SDR9C7	Q8NEX9	313 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	OR1L4	Q8NGR5	311 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	RLN3	Q8WXF3	142 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	TCEANC2	Q96MN5	208 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	RMND5A	Q9H871	391 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	KCNJ16	Q9NPI9	418 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	CGN	Q9P2M7	1197 aa	Known RBP	0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	EPS15L1	Q9UBC2	864 aa		0.62	□□□□□ -2.31
FAM107B-222	ENST00000488576	CNTNAP1	P78357	1384 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	IGHV3-72	A0A0B4J1Y9	119 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	IGKV1-8	A0A0C4DH67	115 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	ZNF816-ZNF321P	A0A0X1KG74	233 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	SNTN	A6NMZ2	147 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576		J3QRE1	110 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	GOSR2	O14653	212 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	LHB	P01229	141 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	FGG	P02679	453 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	ZNF688	P0C7X2	276 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	CALM1	P0DP23	149 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	CALM2	P0DP24	149 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	CALM3	P0DP25	149 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	HRES1	P13985	223 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	CCNB1	P14635	433 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	ME2	P23368	584 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	TNFSF9	P41273	254 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	ACTG2	P63267	376 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	SLC25A11	Q02978	314 aa	Known RBP	0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	TCP10	Q12799	353 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	MRPL28	Q13084	256 aa	Known RBP	0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	GK3P	Q14409	553 aa		0.61	□□□□□ -2.31
FAM107B-222	ENST00000488576	CLINT1	Q14677	625 aa		0.61	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms