RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CUBNO60494 3623 aa12.2□□□□□ -0.46
COL9A2-208ENST00000488463 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 IGLV3-9A0A075B6K5 115 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 IGLV1-36A0A0B4J1U3 117 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 IQCMA0A1B0GVH7 501 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 A0A1W2PPL8 197 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 AQP12BA6NM10 295 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 BHLHE40O14503 412 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 MPZL1O95297 269 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 PTHP01270 115 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 GASTP01350 101 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 FAM157BP0CG42 384 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 RAP2AP10114 183 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 GAAP10253 952 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 ZNF250P15622 560 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 HIST1H1CP16403 213 aaKnown RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 STOMP27105 288 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 IFNGR2P38484 337 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 RPS6KA3P51812 740 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 UCP2P55851 309 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 DSCR9P59020 149 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 KCNMB1Q16558 191 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 FAM98BQ52LJ0 330 aaKnown RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 ZNF362Q5T0B9 420 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 OTPQ5XKR4 325 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 ZNF774Q6NX45 483 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 CLEC2AQ6UVW9 174 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 AQP12AQ8IXF9 295 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 ZNF101Q8IZC7 436 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 OR8D4Q8NGM9 314 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 CANT1Q8WVQ1 401 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 POP5Q969H6 163 aaKnown RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 ERMAPQ96PL5 475 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 SNX18Q96RF0 628 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 CADM1Q9BY67 442 aaKnown RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 NDEL1Q9GZM8 345 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 MMADHCQ9H3L0 296 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 EGLN3Q9H6Z9 239 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 CCNB1IP1Q9NPC3 277 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 IL20Q9NYY1 176 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 FBXO9Q9UK97 447 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 FZR1Q9UM11 496 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 COA3Q9Y2R0 106 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-208ENST00000488463 TIMM10BQ9Y5J6 103 aa12.19□□□□□ -0.46
COL9A2-208ENST00000488463 FAM171A2A8MVW0 826 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 SLC16A7O60669 478 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 KHDRBS3O75525 346 aaKnown RBP12.18□□□□□ -0.46
COL9A2-208ENST00000488463 GPANK1O95872 356 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 CLPTM1O96005 669 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 ADRA2AP08913 450 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 SLC6A6P31641 620 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 RPS23P62266 143 aaKnown RBP12.18□□□□□ -0.46
COL9A2-208ENST00000488463 GALK2Q01415 458 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 HSF2Q03933 536 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 PLP2Q04941 152 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 MICAQ29983 383 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 TBC1D28Q2M2D7 210 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 TMEM179BQ7Z7N9 219 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 GLB1L2Q8IW92 636 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 OR6V1Q8N148 313 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 LINC00471Q8N535 108 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 NPEPL1Q8NDH3 523 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 OR1J2Q8NGS2 313 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 FAM168AQ92567 244 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 RAB3IPQ96QF0 476 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-208ENST00000488463 NMNAT3Q96T66 252 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 VRK1Q99986 396 aaPredicted RBP12.18□□□□□ -0.46
COL9A2-208ENST00000488463 SYT3Q9BQG1 590 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 RHNO1Q9BSD3 238 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 WACQ9BTA9 647 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 CHID1Q9BWS9 393 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 DGCR6LQ9BY27 220 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 KCNN2Q9H2S1 579 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 CDH20Q9HBT6 801 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 CDH10Q9Y6N8 788 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 COL6A5A8TX70 2615 aa12.18□□□□□ -0.46
COL9A2-208ENST00000488463 TCRBV3S1A0A5B6 114 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 OR6C68A6NDL8 312 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 ERICH4A6NGS2 130 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 C12orf71A8MTZ7 269 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 VSTM5A8MXK1 200 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 GSC2O15499 205 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 SYNGR3O43761 229 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 IDH3BO43837 385 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 DNAJC8O75937 253 aaPredicted RBP12.17□□□□□ -0.46
COL9A2-208ENST00000488463 CCNB2O95067 398 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 APLNRP35414 380 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 ALDH3B1P43353 468 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 PCBD1P61457 104 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 LSM6P62312 80 aaKnown RBP12.17□□□□□ -0.46
COL9A2-208ENST00000488463 HIST1H3AP68431 136 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 LOXL1Q08397 574 aaPredicted RBP12.17□□□□□ -0.46
COL9A2-208ENST00000488463 MAD2L1BPQ15013 274 aaPredicted RBP12.17□□□□□ -0.46
COL9A2-208ENST00000488463 HIST2H3PS2Q5TEC6 136 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 RASSF6Q6ZTQ3 369 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 HIST2H3AQ71DI3 136 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 ZBTB46Q86UZ6 589 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 AQP11Q8NBQ7 271 aa12.17□□□□□ -0.46
COL9A2-208ENST00000488463 OR4K13Q8NH42 304 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms