RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ARR3P36575 388 aa9□□□□□ -0.97
SKA1-204ENST00000488454 CAPGP40121 348 aa9□□□□□ -0.97
SKA1-204ENST00000488454 VHLP40337 213 aa9□□□□□ -0.97
SKA1-204ENST00000488454 HSPA13P48723 471 aa9□□□□□ -0.97
SKA1-204ENST00000488454 EFNB1P98172 346 aa9□□□□□ -0.97
SKA1-204ENST00000488454 IL5RAQ01344 420 aa9□□□□□ -0.97
SKA1-204ENST00000488454 TEKQ02763 1124 aa9□□□□□ -0.97
SKA1-204ENST00000488454 HSF2Q03933 536 aa9□□□□□ -0.97
SKA1-204ENST00000488454 PLP2Q04941 152 aa9□□□□□ -0.97
SKA1-204ENST00000488454 PIGFQ07326 219 aa9□□□□□ -0.97
SKA1-204ENST00000488454 TAB1Q15750 504 aa9□□□□□ -0.97
SKA1-204ENST00000488454 SLC35D3Q5M8T2 416 aa9□□□□□ -0.97
SKA1-204ENST00000488454 MEDAGQ5VYS4 303 aa9□□□□□ -0.97
SKA1-204ENST00000488454 FOXL2NBQ6ZUU3 175 aa9□□□□□ -0.97
SKA1-204ENST00000488454 GID4Q8IVV7 300 aa9□□□□□ -0.97
SKA1-204ENST00000488454 SKA3Q8IX90 412 aa9□□□□□ -0.97
SKA1-204ENST00000488454 WDR31Q8NA23 367 aa9□□□□□ -0.97
SKA1-204ENST00000488454 SETD9Q8NE22 299 aa9□□□□□ -0.97
SKA1-204ENST00000488454 OR51L1Q8NGJ5 315 aa9□□□□□ -0.97
SKA1-204ENST00000488454 C11orf40Q8WZ69 217 aa9□□□□□ -0.97
SKA1-204ENST00000488454 RFKQ969G6 155 aa9□□□□□ -0.97
SKA1-204ENST00000488454 Q96MT0 163 aa9□□□□□ -0.97
SKA1-204ENST00000488454 PSMG3-AS1Q96PY0 264 aa9□□□□□ -0.97
SKA1-204ENST00000488454 PITX2Q99697 317 aa9□□□□□ -0.97
SKA1-204ENST00000488454 WACQ9BTA9 647 aa9□□□□□ -0.97
SKA1-204ENST00000488454 ADI1Q9BV57 179 aa9□□□□□ -0.97
SKA1-204ENST00000488454 C1QTNF6Q9BXI9 259 aa9□□□□□ -0.97
SKA1-204ENST00000488454 NMNAT2Q9BZQ4 307 aa9□□□□□ -0.97
SKA1-204ENST00000488454 HINT3Q9NQE9 182 aaKnown RBP9□□□□□ -0.97
SKA1-204ENST00000488454 ASH1LQ9NR48 2969 aaKnown RBP9□□□□□ -0.97
SKA1-204ENST00000488454 CLN6Q9NWW5 311 aa9□□□□□ -0.97
SKA1-204ENST00000488454 CRIM1Q9NZV1 1036 aa9□□□□□ -0.97
SKA1-204ENST00000488454 SLC25A15Q9Y619 301 aa9□□□□□ -0.97
SKA1-204ENST00000488454 ALPK2Q86TB3 2170 aa9□□□□□ -0.97
SKA1-204ENST00000488454 FLNBO75369 2602 aaKnown RBP8.99□□□□□ -0.97
SKA1-204ENST00000488454 M0R129 80 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 DLGAP1O14490 977 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 PRODHO43272 600 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 MPZL1O95297 269 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 RAB36O95755 333 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 PTHP01270 115 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 HLA-HP01893 362 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 HRGP04196 525 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 CST2P09228 141 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 CBR1P16152 277 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 CCKARP32238 428 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 ATP6V1E1P36543 226 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 SNRPGP62308 76 aaKnown RBP8.99□□□□□ -0.97
SKA1-204ENST00000488454 LSM6P62312 80 aaKnown RBP8.99□□□□□ -0.97
SKA1-204ENST00000488454 RAB1AP62820 205 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 ADAM8P78325 824 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 IL18R1Q13478 541 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 APOFQ13790 326 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 KCNMB1Q16558 191 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 GSG1Q2KHT4 349 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 LCN1P1Q5VSP4 162 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 NXNL2Q5VZ03 156 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 MEPCEQ7L2J0 689 aaKnown RBP8.99□□□□□ -0.97
SKA1-204ENST00000488454 OR2AJ1Q8NGZ0 328 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 HTRA1Q92743 480 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 UBE2FQ969M7 185 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 NABP1Q96AH0 204 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 TEAD3Q99594 435 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 ZNF416Q9BWM5 594 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 EMC7Q9NPA0 242 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 RASSF1Q9NS23 344 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 PLEKHB1Q9UF11 243 aaPredicted RBP8.99□□□□□ -0.97
SKA1-204ENST00000488454 KCNN3Q9UGI6 736 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 KCNG2Q9UJ96 466 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 FBXL3Q9UKT7 428 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 TIMM10BQ9Y5J6 103 aa8.99□□□□□ -0.97
SKA1-204ENST00000488454 IQCMA0A1B0GVH7 501 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 TVP23AA6NH52 213 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 E9PQ18 207 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 M0R1B8 84 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 ZNF593O00488 134 aaPredicted RBP8.98□□□□□ -0.97
SKA1-204ENST00000488454 GPANK1O95872 356 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 IGHA1P01876 353 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 TFP02787 698 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 THBDP07204 575 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 PATE4P0C8F1 98 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 IGFBP2P18065 325 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 ZNF83P51522 516 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 AQP4P55087 323 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 CDH11P55287 796 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 TUBA1BP68363 451 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 TUBA4AP68366 448 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 ADARB1P78563 741 aaKnown RBP8.98□□□□□ -0.97
SKA1-204ENST00000488454 SCRN3Q0VDG4 424 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 TMED1Q13445 227 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 AQP6Q13520 282 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 SLC25A30Q5SVS4 291 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 C6orf52Q5T4I8 152 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 AADACL4Q5VUY2 407 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 ZNF691Q5VV52 312 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 UGT2A3Q6UWM9 527 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 TMEM108Q6UXF1 575 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 IZUMO2Q6UXV1 221 aa8.98□□□□□ -0.97
SKA1-204ENST00000488454 TUBA1AQ71U36 451 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms