RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 FAM49BQ9NUQ9 324 aa0.87□□□□□ -2.27
SENP6-210ENST00000487548 TMED5Q9Y3A6 229 aa0.87□□□□□ -2.27
SENP6-210ENST00000487548 CENPVL3A0A0U1RRI6 287 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 TMEM120BA0PK00 339 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 ZNF878C9JN71 531 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 GOLGA8SH3BPF8 625 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 GOSR2O14653 212 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 ANGPT2O15123 496 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 POLR1CO15160 346 aaPredicted RBP0.86□□□□□ -2.27
SENP6-210ENST00000487548 CCNB1P14635 433 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 IL1RNP18510 177 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 RAB3BP20337 219 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 PSMA5P28066 241 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 CASP14P31944 242 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 PSMD8P48556 350 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 RBX1P62877 108 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 FGL1Q08830 312 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 CDH17Q12864 832 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 CDC37Q16543 378 aaPredicted RBP0.86□□□□□ -2.27
SENP6-210ENST00000487548 THEM4Q5T1C6 240 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 GUSBP11Q6P575 273 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 LRRC74BQ6ZQY2 392 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 PSTKQ8IV42 348 aaKnown RBP0.86□□□□□ -2.27
SENP6-210ENST00000487548 APCDD1LQ8NCL9 501 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 SHC3Q92529 594 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 THRSPQ92748 146 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 PTX4Q96A99 478 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 NTAN1Q96AB6 310 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 SEH1LQ96EE3 360 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 C12orf42Q96LP6 360 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 SHANK2-AS3Q9BTD1 123 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 C1orf198Q9H425 327 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 EPS15L1Q9UBC2 864 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 CTNNA3Q9UI47 895 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 PIGLQ9Y2B2 252 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 CBY1Q9Y3M2 126 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 SEC16AO15027 2179 aa0.86□□□□□ -2.27
SENP6-210ENST00000487548 BTNL10A8MVZ5 291 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 SOX15O60248 233 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 DPM1O60762 260 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 PEX11AO75192 247 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 SNNO75324 88 aaPredicted RBP0.85□□□□□ -2.27
SENP6-210ENST00000487548 DEDDO75618 318 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 OR5H8P0DN80 308 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 DBTP11182 482 aaKnown RBP0.85□□□□□ -2.27
SENP6-210ENST00000487548 TNFSF9P41273 254 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 TAS2R31P59538 309 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 ACTG2P63267 376 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 CRADDP78560 199 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 MXD1Q05195 221 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 FUT5Q11128 374 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 EXOC3L2Q2M3D2 409 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 RNASE13Q5GAN3 156 aaKnown RBP0.85□□□□□ -2.27
SENP6-210ENST00000487548 CCNJQ5T5M9 372 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 HCP5Q6MZN7 132 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 TMEM136Q6ZRR5 245 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 LINC00336Q6ZUF6 198 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 TMEM256Q8N2U0 113 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 METTL13Q8N6R0 699 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 GMCL1P1Q8NEA9 526 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 KLF14Q8TD94 323 aaPredicted RBP0.85□□□□□ -2.27
SENP6-210ENST00000487548 GALNT14Q96FL9 552 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 DNAJC1Q96KC8 554 aaKnown RBP0.85□□□□□ -2.27
SENP6-210ENST00000487548 C16orf45Q96MC5 204 aaPredicted RBP0.85□□□□□ -2.27
SENP6-210ENST00000487548 TMEM43Q9BTV4 400 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 FGF23Q9GZV9 251 aaPredicted RBP0.85□□□□□ -2.27
SENP6-210ENST00000487548 SGK2Q9HBY8 427 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 KCNJ16Q9NPI9 418 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 C8orf17Q9NRJ1 99 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 HPF1Q9NWY4 346 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 ENOPH1Q9UHY7 261 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 ST3GAL6Q9Y274 331 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 HYOU1Q9Y4L1 999 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 PEX16Q9Y5Y5 336 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
SENP6-210ENST00000487548 SCN1AP35498 2009 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 HELZ2Q9BYK8 2649 aaKnown RBP0.84□□□□□ -2.27
SENP6-210ENST00000487548 TRAV6A0A075B6T7 132 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 ZNF816-ZNF321PA0A0X1KG74 233 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 A0A1B0GVL5 298 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 A0A1W2PPE3 182 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 FAM47DPA6NHR8 397 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 SNTNA6NMZ2 147 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 HAS3O00219 553 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 TIMM8AO60220 97 aaPredicted RBP0.84□□□□□ -2.27
SENP6-210ENST00000487548 REM1O75628 298 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 B3GALNT1O75752 331 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 H6PDO95479 791 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 TSPAN12O95859 305 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 IGLV3-25P01717 112 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 FGGP02679 453 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 HEXBP07686 556 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 ZNF688P0C7X2 276 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 ME2P23368 584 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 LOXP28300 417 aaPredicted RBP0.84□□□□□ -2.27
SENP6-210ENST00000487548 GPX6P59796 221 aa0.84□□□□□ -2.27
SENP6-210ENST00000487548 UBE2NP61088 152 aaKnown RBP0.84□□□□□ -2.27
SENP6-210ENST00000487548 POLR2FP61218 127 aaKnown RBP0.84□□□□□ -2.27
SENP6-210ENST00000487548 MEF2CQ06413 473 aaPredicted RBP0.84□□□□□ -2.27
SENP6-210ENST00000487548 TWF1Q12792 350 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms