RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 FAHD2BQ6P2I3 314 aaPredicted RBP20.88■□□□□ 0.93
LIME1-206ENST00000487026 THSD4Q6ZMP0 1018 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 FOXL2NBQ6ZUU3 175 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 MBOAT2Q6ZWT7 520 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 TREML1Q86YW5 311 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 FNDC8Q8TC99 324 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 FAHD2AQ96GK7 314 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 ZNF665Q9H7R5 613 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 SAP30LQ9HAJ7 183 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 EMC7Q9NPA0 242 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 GRIP1Q9Y3R0 1128 aa20.88■□□□□ 0.93
LIME1-206ENST00000487026 A6NIZ1 184 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 PRSS23O95084 383 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 NCK1P16333 377 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 ZNF26P17031 533 aaPredicted RBP20.87■□□□□ 0.93
LIME1-206ENST00000487026 RPL4P36578 427 aaKnown RBP20.87■□□□□ 0.93
LIME1-206ENST00000487026 SLC9A3P48764 834 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 RAP1BP61224 184 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 PCBD1P61457 104 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 PPP1CBP62140 327 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 RAP1AP62834 184 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 TEKQ02763 1124 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 FAM205BPQ63HN1 556 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 TSEN54Q7Z6J9 526 aaKnown RBP20.87■□□□□ 0.93
LIME1-206ENST00000487026 RNF113BQ8IZP6 322 aaKnown RBP20.87■□□□□ 0.93
LIME1-206ENST00000487026 HOPXQ9BPY8 73 aaPredicted RBP20.87■□□□□ 0.93
LIME1-206ENST00000487026 WIPI2Q9Y4P8 454 aa20.87■□□□□ 0.93
LIME1-206ENST00000487026 ZSCAN5BA6NJL1 495 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 MSR1P21757 451 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 HNRNPA0Q13151 305 aaKnown RBP20.86■□□□□ 0.93
LIME1-206ENST00000487026 HFEQ30201 348 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 ANKDD1AQ495B1 522 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 MBNL2Q5VZF2 373 aaKnown RBP20.86■□□□□ 0.93
LIME1-206ENST00000487026 C8orf82Q6P1X6 216 aaPredicted RBP20.86■□□□□ 0.93
LIME1-206ENST00000487026 ZNF771Q7L3S4 317 aaPredicted RBP20.86■□□□□ 0.93
LIME1-206ENST00000487026 CCL17Q92583 94 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 C4orf45Q96LM5 186 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 Q96M85 177 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 EFCAB1Q9HAE3 211 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 NMNAT1Q9HAN9 279 aaPredicted RBP20.86■□□□□ 0.93
LIME1-206ENST00000487026 POLE4Q9NR33 117 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 GRHPRQ9UBQ7 328 aa20.86■□□□□ 0.93
LIME1-206ENST00000487026 PLSCR5A0PG75 271 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 CCDC22O60826 627 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 ZBED5Q49AG3 693 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 SPRNQ5BIV9 151 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 OTPQ5XKR4 325 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 ACSM5Q6NUN0 579 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 UNQ6126/PRO20091Q6UXV3 157 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 TMPRSS11FQ6ZWK6 438 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 FAM162AQ96A26 154 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 MSL2Q9HCI7 577 aa20.85■□□□□ 0.93
LIME1-206ENST00000487026 TRAV20A0A0B4J274 112 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 C12orf71A8MTZ7 269 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 CLDN25C9JDP6 229 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 PLPP2O43688 288 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 DEAF1O75398 565 aaPredicted RBP20.84■□□□□ 0.93
LIME1-206ENST00000487026 MPZL1O95297 269 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 CD14P08571 375 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 RBMXP38159 391 aaKnown RBP20.84■□□□□ 0.93
LIME1-206ENST00000487026 MDH1P40925 334 aaKnown RBP20.84■□□□□ 0.93
LIME1-206ENST00000487026 MESTQ5EB52 335 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 FAM209AQ5JX71 171 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 SHQ1Q6PI26 577 aaKnown RBP20.84■□□□□ 0.93
LIME1-206ENST00000487026 RRM2BQ7LG56 351 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 ELMOD3Q96FG2 381 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 FAM46AQ96IP4 442 aaKnown RBP20.84■□□□□ 0.93
LIME1-206ENST00000487026 KCTD14Q9BQ13 255 aaPredicted RBP20.84■□□□□ 0.93
LIME1-206ENST00000487026 ENPP4Q9Y6X5 453 aa20.84■□□□□ 0.93
LIME1-206ENST00000487026 RGS9O75916 674 aaPredicted RBP20.83■□□□□ 0.93
LIME1-206ENST00000487026 VENTXO95231 258 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 AVPP01185 164 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 NUDT2P50583 147 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 HSP90B2PQ58FF3 399 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 C1orf229Q6ZS94 237 aaPredicted RBP20.83■□□□□ 0.93
LIME1-206ENST00000487026 CYP4Z1Q86W10 505 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 SLC7A13Q8TCU3 470 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 RAB1CQ92928 201 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 POFUT1Q9H488 388 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 ELOVL3Q9HB03 270 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 G6PC2Q9NQR9 355 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 KLHL21Q9UJP4 597 aa20.83■□□□□ 0.93
LIME1-206ENST00000487026 XKRYO14609 159 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 IMPA2O14732 288 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 ICMTO60725 284 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 PNPP00491 289 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 IGHV2-5P01817 119 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 ANPEPP15144 967 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 ARHGDIAP52565 204 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 FAM122BQ7Z309 247 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 SYT9Q86SS6 491 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 RASD2Q96D21 266 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 TIMD4Q96H15 378 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 ZNF570Q96NI8 536 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 RERGLQ9H628 205 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 CYSLTR2Q9NS75 346 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 EGFL7Q9UHF1 273 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 IL20RAQ9UHF4 553 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 NBEAL1Q6ZS30 2694 aa20.82■□□□□ 0.92
LIME1-206ENST00000487026 LOC105371242A0A075B767 164 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms