RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 PRICKLE4Q2TBC4 344 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TRMT12Q53H54 448 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TCEAL5Q5H9L2 206 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 FAM74A1Q5RGS3 127 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 AGBL4Q5VU57 503 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ELP2Q6IA86 826 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 LEG1Q6P5S2 330 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM205Q6UW68 189 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ABHD13Q7L211 337 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 NUP54Q7Z3B4 507 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ADGRE4PQ86SQ3 457 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC25A42Q86VD7 318 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PARGQ86W56 976 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF440Q8IYI8 595 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PRSS35Q8N3Z0 413 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 LINC00469Q8N7U9 141 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 OR51L1Q8NGJ5 315 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 OR1S2Q8NGQ3 325 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 OR1J2Q8NGS2 313 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 OR13C8Q8NGS7 320 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 OR6K6Q8NGW6 343 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 CD99L2Q8TCZ2 262 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 GLYATL2Q8WU03 294 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 MITD1Q8WV92 249 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SMARCD2Q92925 531 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PPP1R14AQ96A00 147 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM106AQ96A25 262 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 FAM3DQ96BQ1 224 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 RASD2Q96D21 266 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SEH1LQ96EE3 360 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PIK3IP1Q96FE7 263 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SHDQ96IW2 340 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SLC41A2Q96JW4 573 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 Q96M85 177 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF75AQ96N20 296 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PTCHD1Q96NR3 888 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 OR2A5Q96R48 311 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 NMNAT3Q96T66 252 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PRRT1Q99946 306 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 VRK1Q99986 396 aaPredicted RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 NUDT16L1Q9BRJ7 211 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF471Q9BX82 626 aaPredicted RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SEC11CQ9BY50 192 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 EGLN1Q9GZT9 426 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 CHST6Q9GZX3 395 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 COMMD4Q9H0A8 199 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 LMAN2LQ9H0V9 348 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ESRP2Q9H6T0 727 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM185BQ9H7F4 350 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 WDR76Q9H967 626 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 GCM1Q9NP62 436 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 MMP26Q9NRE1 261 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ASF1BQ9NVP2 202 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 COMMD9Q9P000 198 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 MBD2Q9UBB5 411 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ZNF629Q9UEG4 869 aaPredicted RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 PILRAQ9UKJ1 303 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 NOSIPQ9Y314 301 aaKnown RBP4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 ADAM18Q9Y3Q7 739 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 TMEM14AQ9Y6G1 99 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SPACA6W5XKT8 324 aa4.22□□□□□ -1.73
SMARCC1-206ENST00000485737 SCN5AQ14524 2016 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 TRAV18A0A075B6X5 111 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 A0A087WV48 116 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 A0A0B4J2A0 478 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 A0A1B0GVT2 93 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 TMEM72A0PK05 275 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 OR6C74A6NCV1 312 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 IGLON5A6NGN9 336 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 LRRC72A6NJI9 287 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 OR52A4PA6NMU1 304 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 H0YC42 278 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 CYR61O00622 381 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 SIGLEC5O15389 551 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 NUDT21O43809 227 aaKnown RBP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 FGF18O76093 207 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 ACTL6AO96019 429 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 IGKV1D-16P01601 117 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 HLA-AP01891 365 aaKnown RBP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 AMY2AP04746 511 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 S100A8P05109 93 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 CRHP06850 196 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 ITGA5P08648 1049 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 HNRNPA1P09651 372 aaKnown RBP eCLIP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 LINC00271P0C7V0 271 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 SLC35E2P0CK97 266 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 PNMTP11086 282 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 TPT1P13693 172 aaKnown RBP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 ABOP16442 354 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 IGFBP3P17936 291 aaPredicted RBP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 PI3P19957 117 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 TBPP20226 339 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 ALOX5APP20292 161 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 GABRA3P34903 492 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 DRD3P35462 400 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 RPL4P36578 427 aaKnown RBP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 RPL35P42766 123 aaKnown RBP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 CDKN2AP42771 156 aaKnown RBP4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 MAGEB1P43366 347 aa4.21□□□□□ -1.74
SMARCC1-206ENST00000485737 PPICP45877 212 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms