RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CGAP01215 116 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 MSR1P21757 451 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.36
LRIF1-202ENST00000485275 TIMP3P35625 211 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 TGFBR2P37173 567 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.36
LRIF1-202ENST00000485275 TIGD6Q17RP2 521 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 OR2A2Q6IF42 318 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 SLC18B1Q6NT16 456 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 DCXRQ7Z4W1 244 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 LRRC18Q8N456 261 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 KLHL36Q8N4N3 616 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 ZFP41Q8N8Y5 198 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 ST6GALNAC3Q8NDV1 305 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 OR6K3Q8NGY3 331 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 FGFBP3Q8TAT2 258 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 STARD4Q96DR4 205 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 FBXO17Q96EF6 278 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 RBM38Q9H0Z9 239 aaKnown RBP12.77□□□□□ -0.36
LRIF1-202ENST00000485275 ZNF224Q9NZL3 707 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 LAMP5Q9UJQ1 280 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 CAB39Q9Y376 341 aaPredicted RBP12.77□□□□□ -0.36
LRIF1-202ENST00000485275 EMC9Q9Y3B6 208 aa12.77□□□□□ -0.36
LRIF1-202ENST00000485275 SIRT4Q9Y6E7 314 aaPredicted RBP12.77□□□□□ -0.36
LRIF1-202ENST00000485275 ZFYVE26Q68DK2 2539 aa12.77□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF503-AS2A6NEH8 195 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 A6NHS1 94 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF587BE7ETH6 402 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 HSMCR30P0CW71 290 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 TMIGD3P0DMS9 266 aaPredicted RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 OR8G3PP0DMU2 310 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF823P16415 610 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 EIF2B1Q14232 305 aaKnown RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 SSX1Q16384 188 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 SGCAQ16586 387 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 FBXW9Q5XUX1 488 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 LRRN1Q6UXK5 716 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 SPATC1Q76KD6 591 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 KLBQ86Z14 1044 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 UBE2J2Q8N2K1 259 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 THEM6Q8WUY1 208 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 HSD17B8Q92506 261 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 FCGR1BQ92637 280 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 COG8Q96MW5 612 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 BBC3Q96PG8 261 aaPredicted RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 MGLLQ99685 303 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 NAA50Q9GZZ1 169 aaKnown RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 PNRC2Q9NPJ4 139 aaKnown RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 B3GAT2Q9NPZ5 323 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 SLCO1C1Q9NYB5 712 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 POLEQ07864 2286 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF670-ZNF695F2Z2N8 137 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 RER1O15258 196 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 KRT33AO76009 404 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 PATE4P0C8F1 98 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF84P51523 738 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 PER3P56645 1201 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 ARF1P84077 181 aaKnown RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 ATCAYQ86WG3 371 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 OR52N5Q8NH56 324 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 OPN3Q9H1Y3 402 aaPredicted RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 VCX3AQ9NNX9 186 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 CHCHD3Q9NX63 227 aaKnown RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 UPB1Q9UBR1 384 aa12.76□□□□□ -0.37
LRIF1-202ENST00000485275 GDF2Q9UK05 429 aaPredicted RBP12.76□□□□□ -0.37
LRIF1-202ENST00000485275 A0A0G2JNJ9 132 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 PNMA8CA0A1B0GUJ8 204 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 OR6C65A6NJZ3 312 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 J3QLW9 94 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF19P17023 458 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 IGHV1-2P23083 117 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 ANOS1P23352 680 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 LSM6P62312 80 aaKnown RBP12.75□□□□□ -0.37
LRIF1-202ENST00000485275 PMPCAQ10713 525 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 MRPL49Q13405 166 aaKnown RBP12.75□□□□□ -0.37
LRIF1-202ENST00000485275 SF3B4Q15427 424 aaKnown RBP eCLIP12.75□□□□□ -0.37
LRIF1-202ENST00000485275 TSTQ16762 297 aaKnown RBP12.75□□□□□ -0.37
LRIF1-202ENST00000485275 ARMCX4Q5H9R4 360 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 FAM27BQ5VT28 67 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 VASH1Q7L8A9 365 aaPredicted RBP12.75□□□□□ -0.37
LRIF1-202ENST00000485275 ZNF627Q7L945 461 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 SKA3Q8IX90 412 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 SYS1Q8N2H4 156 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 SLC22A24Q8N4F4 322 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 OR10H5Q8NGA6 315 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 SNX33Q8WV41 574 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 YIPF6Q96EC8 236 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 OR8B4Q96RC9 309 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 MNTQ99583 582 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 SIAEQ9HAT2 523 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 Q9UFV3 132 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 FBXL3Q9UKT7 428 aa12.75□□□□□ -0.37
LRIF1-202ENST00000485275 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 A0A096LPE4 126 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 A0A1W2PPZ6 126 aa12.74□□□□□ -0.37
LRIF1-202ENST00000485275 ATXN7O15265 892 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms