RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SPANXN2Q5MJ10 180 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 C1orf185Q5T7R7 199 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 SP5Q6BEB4 398 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 C22orf42Q6IC83 251 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 PAMR1Q6UXH9 720 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 PLEKHG7Q6ZR37 379 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 SLC16A9Q7RTY1 509 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 HDDC2Q7Z4H3 204 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 KCTD20Q7Z5Y7 419 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 UBQLNLQ8IYU4 475 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF808Q8N4W9 903 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 MS4A15Q8N5U1 240 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZFP41Q8N8Y5 198 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 FADS6Q8N9I5 356 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF485Q8NCK3 441 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF417Q8TAU3 575 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF524Q96C55 264 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ADAD1Q96M93 576 aaKnown RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 TRIB1Q96RU8 372 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF587Q96SQ5 575 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 DDOQ99489 341 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 TIMP4Q99727 224 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 TM9SF2Q99805 663 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 VKORC1Q9BQB6 163 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF649Q9BS31 505 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 TTYH2Q9BSA4 534 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 MED18Q9BUE0 208 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 NMNAT2Q9BZQ4 307 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 OR11A1Q9GZK7 315 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 NXF2Q9GZY0 626 aaKnown RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 RNF167Q9H6Y7 350 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 SRA1Q9HD15 236 aaKnown RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 CHST11Q9NPF2 352 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 SNTG1Q9NSN8 517 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 Q9UFV3 132 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 DKKL1Q9UK85 242 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 SF3B6Q9Y3B4 125 aaKnown RBP6.16□□□□□ -1.42
BRCA1-216ENST00000484087 HDGFL3Q9Y3E1 203 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 FKBP7Q9Y680 259 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 PDZD2O15018 2839 aa6.16□□□□□ -1.42
BRCA1-216ENST00000484087 A0A075B6Q4 140 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 PRSS37A4D1T9 235 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 NPIPB13A6NJU9 1138 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 FIGNL2A6NMB9 653 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 GJE1A6NN92 205 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 HSPB2A8KAH6 182 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 NPIPB4C9JG80 1138 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 FTCDNL1E5RQL4 147 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 PLPP2O43688 288 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CBR3O75828 277 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CLDN14O95500 239 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 PLGP00747 810 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-216ENST00000484087 KRT8P05787 483 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 INHBBP09529 407 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 GAAP10253 952 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CFL1P23528 166 aaKnown RBP6.15□□□□□ -1.42
BRCA1-216ENST00000484087 MYL9P24844 172 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 DPP4P27487 766 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CD79BP40259 229 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 OR2B6P58173 313 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 B3GALT5-AS1P59052 145 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 KRTAP10-9P60411 292 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF45Q02386 682 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF85Q03923 595 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 FOXF2Q12947 444 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 HSPB2Q16082 182 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ACKR1Q16570 336 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ACSF3Q4G176 576 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CDONQ4KMG0 1287 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CCDC58Q4VC31 144 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 EEF1A1P5Q5VTE0 462 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 RAET1LQ5VY80 246 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF544Q6NX49 715 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 RPL22L1Q6P5R6 122 aaKnown RBP6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CD200R1LQ6Q8B3 271 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ARL9Q6T311 187 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 PXKQ7Z7A4 578 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 PM20D2Q8IYS1 436 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 GCNT2Q8N0V5 402 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 C9orf106Q8NAJ2 232 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 RELL2Q8NC24 303 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-216ENST00000484087 CA5BP1Q8WTZ4 195 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 SARAFQ96BY9 339 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 DNAJA3Q96EY1 480 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 WDYHV1Q96HA8 205 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 KLHL15Q96M94 604 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 SFXN2Q96NB2 322 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 INTS14Q96SY0 518 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 SYT4Q9H2B2 425 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 TMEM185BQ9H7F4 350 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ISG20L2Q9H9L3 353 aaKnown RBP6.15□□□□□ -1.42
BRCA1-216ENST00000484087 ACKR4Q9NPB9 350 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 AKIP1Q9NQ31 210 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 LAMP5Q9UJQ1 280 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 GNG8Q9UK08 70 aa6.15□□□□□ -1.42
BRCA1-216ENST00000484087 A0A1W2PNV4 684 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 OR14I1A6ND48 311 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 LIPT2A6NK58 231 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 FAM171A2A8MVW0 826 aa6.15□□□□□ -1.43
BRCA1-216ENST00000484087 GABRPO00591 440 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms