RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 FBXO17Q96EF6 278 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 DDOQ99489 341 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 TRAF4Q9BUZ4 470 aaPredicted RBP13.52□□□□□ -0.25
RPP40-206ENST00000483546 ZNF416Q9BWM5 594 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 GSX2Q9BZM3 304 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 RERGLQ9H628 205 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 RPRD1BQ9NQG5 326 aaKnown RBP13.52□□□□□ -0.25
RPP40-206ENST00000483546 PAPOLBQ9NRJ5 636 aaKnown RBP13.52□□□□□ -0.25
RPP40-206ENST00000483546 CMC2Q9NRP2 79 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 CBLN4Q9NTU7 201 aa13.52□□□□□ -0.25
RPP40-206ENST00000483546 ZNF701Q9NV72 531 aaPredicted RBP13.52□□□□□ -0.25
RPP40-206ENST00000483546 PRRC2AP48634 2157 aaKnown RBP13.52□□□□□ -0.25
RPP40-206ENST00000483546 OVOL3O00110 214 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 HMGN1P05114 100 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 SOD3P08294 240 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 PRKACGP22612 351 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 NR4A1P22736 598 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 PCSK6P29122 969 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 APLNRP35414 380 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 BLVRAP53004 296 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 SLC25A1P53007 311 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 ESRRGP62508 458 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 NKX6-1P78426 367 aaPredicted RBP13.51□□□□□ -0.25
RPP40-206ENST00000483546 PSG4Q00888 419 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 HGFACQ04756 655 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 DAG1Q14118 895 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 TESK1Q15569 626 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 ZNF362Q5T0B9 420 aaPredicted RBP13.51□□□□□ -0.25
RPP40-206ENST00000483546 UNQ6126/PRO20091Q6UXV3 157 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 SPNS3Q6ZMD2 512 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 C1orf174Q8IYL3 243 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 SLC37A3Q8NCC5 494 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 PYDC1Q8WXC3 89 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 RBM4Q9BWF3 364 aaKnown RBP13.51□□□□□ -0.25
RPP40-206ENST00000483546 CDH20Q9HBT6 801 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 SRA1Q9HD15 236 aaKnown RBP13.51□□□□□ -0.25
RPP40-206ENST00000483546 ATPIF1Q9UII2 106 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 KCNG2Q9UJ96 466 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 ITGB1BP2Q9UKP3 347 aa13.51□□□□□ -0.25
RPP40-206ENST00000483546 NDRG4Q9ULP0 352 aaKnown RBP13.51□□□□□ -0.25
RPP40-206ENST00000483546 DCTN6O00399 190 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
RPP40-206ENST00000483546 GAAP10253 952 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 PAICSP22234 425 aaKnown RBP13.5□□□□□ -0.25
RPP40-206ENST00000483546 STOMP27105 288 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 GLRXP35754 106 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 CDK5Q00535 292 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 SNTB2Q13425 540 aaKnown RBP13.5□□□□□ -0.25
RPP40-206ENST00000483546 EFNB3Q15768 340 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 AMIGO2Q86SJ2 522 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 SLC26A10Q8NG04 563 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 OR10H5Q8NGA6 315 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 TRMT61AQ96FX7 289 aaKnown RBP13.5□□□□□ -0.25
RPP40-206ENST00000483546 TSSK2Q96PF2 358 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 PRRG3Q9BZD7 231 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 SLC25A19Q9HC21 320 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 EMC7Q9NPA0 242 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 KRT84Q9NSB2 600 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 POLR1DQ9Y2S0 133 aa13.5□□□□□ -0.25
RPP40-206ENST00000483546 B9A039 149 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 H3BNX3 289 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 SGCEO43556 437 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 ICMTO60725 284 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 POU1F1P28069 291 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 SERPINF1P36955 418 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 RAD52P43351 418 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 GDI2P50395 445 aaKnown RBP13.49□□□□□ -0.25
RPP40-206ENST00000483546 DAPP51397 102 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 CRISP1P54107 249 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 CRMP1Q14194 572 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 GINS1Q14691 196 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 SHEQ5VZ18 495 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 KDM4DQ6B0I6 523 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 C11orf71Q6IPW1 123 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 PRSS57Q6UWY2 283 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 CPEB3Q8NE35 698 aaKnown RBP13.49□□□□□ -0.25
RPP40-206ENST00000483546 PROKR2Q8NFJ6 384 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 GJC3Q8NFK1 279 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 IPCEF1Q8WWN9 437 aaPredicted RBP13.49□□□□□ -0.25
RPP40-206ENST00000483546 NMNAT2Q9BZQ4 307 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 BCL2L14Q9BZR8 327 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 WNT5BQ9H1J7 359 aa13.49□□□□□ -0.25
RPP40-206ENST00000483546 RTTNQ86VV8 2226 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 ARFGEF3Q5TH69 2177 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 CD8AP01732 235 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 SCG5P05408 212 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 APEX1P27695 318 aaKnown RBP13.48□□□□□ -0.25
RPP40-206ENST00000483546 PTH2RP49190 550 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 EVX1P49640 407 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
RPP40-206ENST00000483546 TEKQ02763 1124 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 ADIPOQQ15848 244 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 ZSCAN26Q16670 478 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 KRT80Q6KB66 452 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 ARL9Q6T311 187 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 UGT2A3Q6UWM9 527 aa13.48□□□□□ -0.25
RPP40-206ENST00000483546 CYB561A3Q8NBI2 242 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms