RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 POLE4Q9NR33 117 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 YAE1D1Q9NRH1 226 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 IL20RAQ9UHF4 553 aa11.93□□□□□ -0.5
VARS-225ENST00000482996 C5orf49A4QMS7 147 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 VWC2LB2RUY7 222 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 SOCS2O14508 198 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 KHDRBS3O75525 346 aaKnown RBP11.92□□□□□ -0.5
VARS-225ENST00000482996 KRT36O76013 467 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 STAMBPO95630 424 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 APEHP13798 732 aaKnown RBP11.92□□□□□ -0.5
VARS-225ENST00000482996 ZNF250P15622 560 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 CTLA4P16410 223 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 ATP6V1B2P21281 511 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 FPR3P25089 353 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 SLC6A6P31641 620 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 SCRN3Q0VDG4 424 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 MAD2L1BPQ15013 274 aaPredicted RBP11.92□□□□□ -0.5
VARS-225ENST00000482996 MOGQ16653 247 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 DNM1P34Q6PK57 102 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 DHFR2Q86XF0 187 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 GNPDA2Q8TDQ7 276 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 SNX33Q8WV41 574 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 POM121L2Q96KW2 1035 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 GPA33Q99795 319 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 ZNF416Q9BWM5 594 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 WNT5BQ9H1J7 359 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 SYT4Q9H2B2 425 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 RERGLQ9H628 205 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 SLCO1C1Q9NYB5 712 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 VSX1Q9NZR4 365 aaPredicted RBP11.92□□□□□ -0.5
VARS-225ENST00000482996 TAAR3PQ9P1P4 343 aa11.92□□□□□ -0.5
VARS-225ENST00000482996 PRPF19Q9UMS4 504 aaKnown RBP11.92□□□□□ -0.5
VARS-225ENST00000482996 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 A8MV72 311 aaPredicted RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 IMPA2O14732 288 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 SLC16A7O60669 478 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 PPP1R3DO95685 299 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 TXNDC12O95881 172 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 MT-ND5P03915 603 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 IGFBP1P08833 259 aaPredicted RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 GZMKP49863 264 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 FXYD6P3P58550 94 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 ENDOGQ14249 297 aaKnown RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 TRIM25Q14258 630 aaKnown RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 RFX4Q33E94 735 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 CYB5R2Q6BCY4 276 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 LCN8Q6JVE9 175 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 ZNF774Q6NX45 483 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 ARL9Q6T311 187 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 RINLQ6ZS11 566 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 GLB1L2Q8IW92 636 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 C1orf174Q8IYL3 243 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 LINC00471Q8N535 108 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 OR1J1Q8NGS3 322 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 ERMAPQ96PL5 475 aaPredicted RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 OR52D1Q9H346 318 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 MAGIXQ9H6Y5 334 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 EMC7Q9NPA0 242 aa11.91□□□□□ -0.5
VARS-225ENST00000482996 MYEF2Q9P2K5 600 aaKnown RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 NDRG4Q9ULP0 352 aaKnown RBP11.91□□□□□ -0.5
VARS-225ENST00000482996 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 LOC100509620A0A075B734 347 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 H0YHG0 523 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 TNFRSF11BO00300 401 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 ARPC3O15145 178 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 CLPTM1O96005 669 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 T-ENOLP0DO92 83 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 GIFP27352 417 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 CRABP1P29762 137 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 GCH1P30793 250 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 GSSP48637 474 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 ERVS71-1P61550 626 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 TSPAN31Q12999 210 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 ZNF718Q3SXZ3 478 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 FAM98BQ52LJ0 330 aaKnown RBP11.9□□□□□ -0.5
VARS-225ENST00000482996 C6orf52Q5T4I8 152 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 C1orf94Q6P1W5 598 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 TMEM154Q6P9G4 183 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 UGT2A3Q6UWM9 527 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 PTCHD4Q6ZW05 846 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 SAMD8Q96LT4 415 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 LRGUKQ96M69 825 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 BTBD10Q9BSF8 475 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 IFT27Q9BW83 186 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 BPESC1Q9GZL8 116 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 ELOVL3Q9HB03 270 aa11.9□□□□□ -0.5
VARS-225ENST00000482996 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.5
VARS-225ENST00000482996 COA3Q9Y2R0 106 aaPredicted RBP11.9□□□□□ -0.5
VARS-225ENST00000482996 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 TCRBV5S2A0A599 114 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 SGCEO43556 437 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 IDH3BO43837 385 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 DOK2O60496 412 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 CRLF1O75462 422 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 RENP00797 406 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 SCG5P05408 212 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 IGHV4-31P0DP07 118 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 COX5BP10606 129 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms