RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 SLC35F6Q8N357 371 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 RPRMLQ8N4K4 120 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 ACBD4Q8NC06 268 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 OR2L5Q8NG80 312 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 OR2M7Q8NG81 312 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 OR5M9Q8NGP3 310 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 OR5M8Q8NGP6 311 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 ST8SIA1Q92185 356 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 MS4A6EQ96DS6 147 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 SMIM10Q96HG1 83 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 ZNF317Q96PQ6 595 aaPredicted RBP5.7□□□□□ -1.5
CLK1-212ENST00000482590 CSF3RQ99062 836 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 KRT12Q99456 494 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 FAM173AQ9BQD7 235 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 EFCAB11Q9BUY7 163 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 OSBPL10Q9BXB5 764 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 UCK2Q9BZX2 261 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 OR8D2Q9GZM6 311 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 ROGDIQ9GZN7 287 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 MTHFD2LQ9H903 347 aaPredicted RBP5.7□□□□□ -1.5
CLK1-212ENST00000482590 MARCH7Q9H992 704 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 POPDC3Q9HBV1 291 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 DEPPQ9NTK1 212 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 UFSP2Q9NUQ7 469 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 MTCH1Q9NZJ7 389 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 IKZF3Q9UKT9 509 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 TMED7Q9Y3B3 224 aa5.7□□□□□ -1.5
CLK1-212ENST00000482590 ZNF469Q96JG9 3925 aaPredicted RBP5.7□□□□□ -1.5
CLK1-212ENST00000482590 TRBV5-7A0A0A0MS05 114 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 PINLYPA6NC86 204 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 WDR1O75083 606 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 GLRA3O75311 464 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 SCGNO76038 276 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 TOXO94900 526 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 OR2F2O95006 317 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 NADKO95544 446 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 LCKP06239 509 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 HOXD4P09016 255 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 ACKR3P25106 362 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 MAGEA5P43359 124 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 DNASE1L1P49184 302 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 COMPP49747 757 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 LIM2P55344 173 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 TAS2R39P59534 338 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 KCNJ2P63252 427 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 TFF3Q07654 80 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 FAM27E3Q08E93 113 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 PNRC1Q12796 327 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 PDIA2Q13087 525 aaKnown RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 SERTAD2Q14140 314 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 TSNQ15631 228 aaKnown RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 C18orf21Q32NC0 220 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 SLC25A35Q3KQZ1 300 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 ZNF260Q3ZCT1 412 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 LINC01620Q4KN68 170 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 XKR6Q5GH73 641 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 RUSC1-AS1Q66K80 236 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 STEAP4Q687X5 459 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 C16orf47Q6ZP98 133 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 WDR53Q7Z5U6 358 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 TGIF2LXQ8IUE1 241 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 TMEM123Q8N131 208 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 LIX1Q8N485 282 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 SNX31Q8N9S9 440 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 THAP8Q8NA92 274 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 MORN4Q8NDC4 146 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 FBXO36Q8NEA4 188 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 OR5L2Q8NGL0 311 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 OR13C9Q8NGT0 318 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 CDC26Q8NHZ8 85 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 SMPDL3BQ92485 455 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 RPL3LQ92901 407 aaKnown RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 SLC38A4Q969I6 547 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 MRPL53Q96EL3 112 aaKnown RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 GRAMD2BQ96HH9 432 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 CAPZA3Q96KX2 299 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 TECTBQ96PL2 329 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 CENPKQ9BS16 269 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 AICDAQ9GZX7 198 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 MFFQ9GZY8 342 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 GAL3ST2Q9H3Q3 398 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 RHOJQ9H4E5 214 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 NT5DC2Q9H857 520 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 ZDHHC11Q9H8X9 412 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 IL1RL2Q9HB29 575 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 LYRM4Q9HD34 91 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 DUSP22Q9NRW4 184 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 TUBA8Q9NY65 449 aaPredicted RBP5.69□□□□□ -1.5
CLK1-212ENST00000482590 B4GALT7Q9UBV7 327 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 ZNF580Q9UK33 172 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 SNX12Q9UMY4 172 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 RASD1Q9Y272 281 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 WDR83OSQ9Y284 106 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 NPTNQ9Y639 398 aa5.69□□□□□ -1.5
CLK1-212ENST00000482590 ACANP16112 2415 aa5.68□□□□□ -1.5
CLK1-212ENST00000482590 TRAV18A0A075B6X5 111 aa5.68□□□□□ -1.5
CLK1-212ENST00000482590 PPIAL4EA0A075B759 164 aa5.68□□□□□ -1.5
CLK1-212ENST00000482590 TRGV5A0A0B4J1U4 118 aa5.68□□□□□ -1.5
CLK1-212ENST00000482590 A0A0G2JMM0 328 aa5.68□□□□□ -1.5
CLK1-212ENST00000482590 ATP6AP2A0A1C7CYW4 349 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms