RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ZNF101Q8IZC7 436 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 SLC25A40Q8TBP6 338 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 RAB1CQ92928 201 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 MARS2Q96GW9 593 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 TIMD4Q96H15 378 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 LRRC37BQ96QE4 947 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 NDEL1Q9GZM8 345 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 SAP30LQ9HAJ7 183 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 LPAR2Q9HBW0 351 aa11.46□□□□□ -0.57
CTDSP1-208ENST00000482272 A0A087WUU8 490 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 TRAV20A0A0B4J274 112 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 C12orf71A8MTZ7 269 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 CLDN25C9JDP6 229 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 XKRYO14609 159 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 AHCYL1O43865 530 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 SERPINA1P01009 418 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 MSR1P21757 451 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 WNT5AP41221 380 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 GLO1Q04760 184 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 ZBED5Q49AG3 693 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 SPATA46Q5T0L3 261 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 AVPI1Q5T686 147 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 FAHD2BQ6P2I3 314 aaPredicted RBP11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 SHQ1Q6PI26 577 aaKnown RBP11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 TBPL2Q6SJ96 375 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 FOXL2NBQ6ZUU3 175 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 TMPRSS11FQ6ZWK6 438 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 MBOAT2Q6ZWT7 520 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 USP51Q70EK9 711 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 ABHD4Q8TB40 342 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 KLF14Q8TD94 323 aaPredicted RBP11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 FAM162AQ96A26 154 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 RAB39BQ96DA2 213 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 ELMOD3Q96FG2 381 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 FAHD2AQ96GK7 314 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 C4orf45Q96LM5 186 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 OR2J1Q9GZK6 312 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 EGLN1Q9GZT9 426 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 WNT5BQ9H1J7 359 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 CGGBP1Q9UFW8 167 aaPredicted RBP11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 ZDHHC8Q9ULC8 765 aa11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 NDRG4Q9ULP0 352 aaKnown RBP11.45□□□□□ -0.58
CTDSP1-208ENST00000482272 A0A0A6YYJ9 748 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 H3BSA7 217 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 SPRY3O43610 288 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 IGHV1-46P01743 117 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 SCG5P05408 212 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 CD14P08571 375 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 TUBG1P23258 451 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 RBMXP38159 391 aaKnown RBP11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 MDH1P40925 334 aaKnown RBP11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 MMP15P51511 669 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 SLC7A2P52569 658 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 PPP1CBP62140 327 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 SLC3A1Q07837 685 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 ZMAT1Q5H9K5 638 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 ZNF774Q6NX45 483 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 HACD2Q6Y1H2 254 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 ZER1Q7Z7L7 766 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 PEG10Q86TG7 708 aaKnown RBP11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 OR13C2Q8NGS9 318 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 IPCEF1Q8WWN9 437 aaPredicted RBP11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 CCL17Q92583 94 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 HSH2DQ96JZ2 352 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 DIRC2Q96SL1 478 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 ANKRD19PQ9H560 264 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 METTL17Q9H7H0 456 aaPredicted RBP11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 ZNF665Q9H7R5 613 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 POLE4Q9NR33 117 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 TUBG2Q9NRH3 451 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 RPS6KA6Q9UK32 745 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 TMEM5Q9Y2B1 443 aa11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 FAM32AQ9Y421 112 aaKnown RBP11.44□□□□□ -0.58
CTDSP1-208ENST00000482272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.585e-8■■■■■ 27.3
CTDSP1-208ENST00000482272 CDC42EP2O14613 210 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 ICMTO60725 284 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 GMNNO75496 209 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 MPZL1O95297 269 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 PNPP00491 289 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 NGFP01138 241 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 COX5BP10606 129 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 NCK1P16333 377 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 ITGA2P17301 1181 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 MPV17P39210 176 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 GSK3BP49841 420 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 NUDT2P50583 147 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 SCRN3Q0VDG4 424 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 FAM156AQ8NDB6 213 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 KCTD14Q9BQ13 255 aaPredicted RBP11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 NMNAT1Q9HAN9 279 aaPredicted RBP11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 MED4Q9NPJ6 270 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 KLHL21Q9UJP4 597 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 WIPI2Q9Y4P8 454 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 ENPP4Q9Y6X5 453 aa11.43□□□□□ -0.58
CTDSP1-208ENST00000482272 H7C1C5 153 aa11.42□□□□□ -0.58
CTDSP1-208ENST00000482272 HAX1O00165 279 aa11.42□□□□□ -0.58
CTDSP1-208ENST00000482272 IMPA2O14732 288 aa11.42□□□□□ -0.58
CTDSP1-208ENST00000482272 ABHD16AO95870 558 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms