RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PPP1CBP62140 327 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 LCN6P62502 163 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 RAP1AP62834 184 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 TRAM2Q15035 370 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 FAM205BPQ63HN1 556 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 ACSM5Q6NUN0 579 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF774Q6NX45 483 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 ZNF730Q6ZMV8 503 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 CPLX4Q7Z7G2 160 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 OAFQ86UD1 273 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 OFCC1Q8IZS5 231 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 OR13C2Q8NGS9 318 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 FNDC8Q8TC99 324 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 RAB1CQ92928 201 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 ELMOD3Q96FG2 381 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 MARS2Q96GW9 593 aaKnown RBP12.97□□□□□ -0.33
LIMS3-203ENST00000480744 NSRP1Q9H0G5 558 aaKnown RBP12.97□□□□□ -0.33
LIMS3-203ENST00000480744 TIMM10BQ9Y5J6 103 aa12.97□□□□□ -0.33
LIMS3-203ENST00000480744 ISPDA4D126 451 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 ZSCAN5BA6NJL1 495 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 PLPP2O43688 288 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 VENTXO95231 258 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 MSR1P21757 451 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 RPL4P36578 427 aaKnown RBP12.96□□□□□ -0.33
LIMS3-203ENST00000480744 GPR4P46093 362 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 LIPEQ05469 1076 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 PRKCDQ05655 676 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 SCGB2A2Q13296 93 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 TMEM255AQ5JRV8 349 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 FAM209AQ5JX71 171 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 ARPINQ7Z6K5 226 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 PIGWQ7Z7B1 504 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 LRRC75AQ8NAA5 344 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 KLF14Q8TD94 323 aaPredicted RBP12.96□□□□□ -0.33
LIMS3-203ENST00000480744 CCL17Q92583 94 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 EMC7Q9NPA0 242 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 MAN2C1Q9NTJ4 1040 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 AP3M1Q9Y2T2 418 aa12.96□□□□□ -0.33
LIMS3-203ENST00000480744 LOC105371242A0A075B767 164 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 CXCR6O00574 342 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 SLC22A2O15244 555 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 NGFP01138 241 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 COX4I1P13073 169 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 MMP15P51511 669 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 ARHGDIAP52565 204 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 ENDOGQ14249 297 aaKnown RBP12.95□□□□□ -0.34
LIMS3-203ENST00000480744 IFI44LQ53G44 452 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 MBNL2Q5VZF2 373 aaKnown RBP12.95□□□□□ -0.34
LIMS3-203ENST00000480744 FKBP9P1Q75LS8 142 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 ZNF418Q8TF45 676 aaPredicted RBP12.95□□□□□ -0.34
LIMS3-203ENST00000480744 GEMIN6Q8WXD5 167 aaKnown RBP12.95□□□□□ -0.34
LIMS3-203ENST00000480744 HSH2DQ96JZ2 352 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 C4orf45Q96LM5 186 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 GAL3ST1Q99999 423 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 EGLN1Q9GZT9 426 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 ELOVL3Q9HB03 270 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 CYSLTR2Q9NS75 346 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 GRHPRQ9UBQ7 328 aa12.95□□□□□ -0.34
LIMS3-203ENST00000480744 NBEAL1Q6ZS30 2694 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 A0A087WUU8 490 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 A0A0A6YYJ9 748 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 A0A0G2JMP0 313 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 A0A0X1KG70 313 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 C12orf71A8MTZ7 269 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 XKRYO14609 159 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 FFAR1O14842 300 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 TIMM8AO60220 97 aaPredicted RBP12.94□□□□□ -0.34
LIMS3-203ENST00000480744 CCDC22O60826 627 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 DEAF1O75398 565 aaPredicted RBP12.94□□□□□ -0.34
LIMS3-203ENST00000480744 ABHD16AO95870 558 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 IGHV2-5P01817 119 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 EPHA1P21709 976 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 SLC9A3P48764 834 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 SLC7A2P52569 658 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 ANKDD1AQ495B1 522 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 TBPL2Q6SJ96 375 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 ARL9Q6T311 187 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 C12orf54Q6X4T0 127 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 FOXL2NBQ6ZUU3 175 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 RRM2BQ7LG56 351 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 SLC15A3Q8IY34 581 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 SEMA6DQ8NFY4 1073 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 OR4M2Q8NGB6 313 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 RP9Q8TA86 221 aaKnown RBP12.94□□□□□ -0.34
LIMS3-203ENST00000480744 ACOT11Q8WXI4 607 aaPredicted RBP12.94□□□□□ -0.34
LIMS3-203ENST00000480744 MSL2Q9HCI7 577 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 G6PC2Q9NQR9 355 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 POLE4Q9NR33 117 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 UBAP1Q9NZ09 502 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 NDRG4Q9ULP0 352 aaKnown RBP12.94□□□□□ -0.34
LIMS3-203ENST00000480744 ADAM18Q9Y3Q7 739 aa12.94□□□□□ -0.34
LIMS3-203ENST00000480744 NME4O00746 187 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 DOK2O60496 412 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 SERPINA1P01009 418 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 AVPP01185 164 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 SCG5P05408 212 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 LIPAP38571 399 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 HTR5AP47898 357 aa12.93□□□□□ -0.34
LIMS3-203ENST00000480744 ACTG1P63261 375 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms